RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 ZIM3Q96PE6 472 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 MRPL47Q9HD33 250 aaKnown RBP12.34□□□□□ -0.43
PCAT1-202ENST00000561978 PRKAG2Q9UGJ0 569 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.34□□□□□ -0.43
PCAT1-202ENST00000561978 NRCAMQ92823 1304 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 H0YGN5 161 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 TLR3O15455 904 aaKnown RBP12.34□□□□□ -0.43
PCAT1-202ENST00000561978 PHF2O75151 1096 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 ACTN2P35609 894 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 NOP14P78316 857 aaKnown RBP12.34□□□□□ -0.43
PCAT1-202ENST00000561978 ZNF211Q13398 564 aaPredicted RBP12.34□□□□□ -0.43
PCAT1-202ENST00000561978 SGSM1Q2NKQ1 1148 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 SPDYCQ5MJ68 293 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 MARCH8Q5T0T0 291 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 RNF149Q8NC42 400 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 RIN2Q8WYP3 895 aaPredicted RBP12.34□□□□□ -0.43
PCAT1-202ENST00000561978 ERP44Q9BS26 406 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 PLEKHA4Q9H4M7 779 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 PCYOX1Q9UHG3 505 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 NR2E3Q9Y5X4 410 aa12.34□□□□□ -0.43
PCAT1-202ENST00000561978 PTPRJQ12913 1337 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 GOLGA6L10A6NI86 522 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 ZBTB42B2RXF5 422 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 MYO1FO00160 1098 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 ACKR2O00590 384 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 GNA15P30679 374 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 HOXC8P31273 242 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 PTPN11Q06124 597 aaPredicted RBP12.33□□□□□ -0.44
PCAT1-202ENST00000561978 POU5F1BQ06416 359 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 ZNF484Q5JVG2 852 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 TMEM270Q6UE05 265 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 KRT35Q92764 455 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 SEZ6LQ9BYH1 1024 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 CALCOCO1Q9P1Z2 691 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 PARP2Q9UGN5 583 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 LCMT1Q9UIC8 334 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 ANAPC7Q9UJX3 599 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 TBX21Q9UL17 535 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 TET1Q8NFU7 2136 aa12.33□□□□□ -0.44
PCAT1-202ENST00000561978 ERICH4A6NGS2 130 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 DAPK3O43293 454 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 HARSP12081 509 aaKnown RBP12.32□□□□□ -0.44
PCAT1-202ENST00000561978 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
PCAT1-202ENST00000561978 ECHS1P30084 290 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 CYP2C18P33260 490 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 WNT7BP56706 349 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 ADAM17P78536 824 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 DRP2Q13474 957 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 TRADDQ15628 312 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 ZBTB41Q5SVQ8 909 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 NAA35Q5VZE5 725 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 MPZL3Q6UWV2 235 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 ZBTB33Q86T24 672 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 RHPN2Q8IUC4 686 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 MAGOHBQ96A72 148 aaKnown RBP12.32□□□□□ -0.44
PCAT1-202ENST00000561978 NFKBIZQ9BYH8 718 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 HIPK3Q9H422 1215 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 FZD8Q9H461 694 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 APOBEC3GQ9HC16 384 aaKnown RBP12.32□□□□□ -0.44
PCAT1-202ENST00000561978 CWC15Q9P013 229 aaKnown RBP12.32□□□□□ -0.44
PCAT1-202ENST00000561978 SCINQ9Y6U3 715 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 MAGEB2O15479 319 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 FAM189A1O60320 539 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 RPS6KA5O75582 802 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 ASS1P00966 412 aaKnown RBP12.32□□□□□ -0.44
PCAT1-202ENST00000561978 EDN1P05305 212 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 IVLP07476 585 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 PYGMP11217 842 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 RAG1P15918 1043 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 CCL23P55773 120 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 YWHAEP62258 255 aaKnown RBP12.32□□□□□ -0.44
PCAT1-202ENST00000561978 TRPC3Q13507 836 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 CYP1B1Q16678 543 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 DUPD1Q68J44 220 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 SPOPLQ6IQ16 392 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 EFCAB12Q6NXP0 572 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 RUFY4Q6ZNE9 571 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 PHF13Q86YI8 300 aaPredicted RBP12.32□□□□□ -0.44
PCAT1-202ENST00000561978 SLC13A5Q86YT5 568 aaPredicted RBP12.32□□□□□ -0.44
PCAT1-202ENST00000561978 RBBP8NLQ8NC74 664 aaPredicted RBP12.32□□□□□ -0.44
PCAT1-202ENST00000561978 OR5B17Q8NGF7 314 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 CPA5Q8WXQ8 436 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 ZBTB9Q96C00 473 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 CYFIP2Q96F07 1278 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 FAXDC2Q96IV6 333 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 CELF4Q9BZC1 486 aaKnown RBP12.32□□□□□ -0.44
PCAT1-202ENST00000561978 FAM129AQ9BZQ8 928 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 ADAM22Q9P0K1 906 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 CPSF3Q9UKF6 684 aaKnown RBP12.32□□□□□ -0.44
PCAT1-202ENST00000561978 NR2E1Q9Y466 385 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 NUB1Q9Y5A7 615 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 SCN5AQ14524 2016 aa12.32□□□□□ -0.44
PCAT1-202ENST00000561978 THAP12O43422 761 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 TNNC2P02585 160 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 GNAT1P11488 350 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 PROZP22891 400 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 FNTAP49354 379 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 PTP4A2Q12974 167 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 ATF7IP2Q5U623 682 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 MON1BQ7L1V2 547 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms