RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 CDK5RAP3Q96JB5 506 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 TMX3Q96JJ7 454 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 MSTO1Q9BUK6 570 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 SLITRK6Q9H5Y7 841 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 CDV3Q9UKY7 258 aaKnown RBP9.09□□□□□ -0.95
PALB2-202ENST00000561514 DSEQ9UL01 958 aa9.09□□□□□ -0.95
PALB2-202ENST00000561514 MAP1BP46821 2468 aaKnown RBP9.09□□□□□ -0.95
PALB2-202ENST00000561514 ZFHX4Q86UP3 3567 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 SLC38A8A6NNN8 435 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 ANKRD63C9JTQ0 380 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 HRO43593 1189 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 TRAK2O60296 914 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 FAM13AO94988 1023 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 PYGBP11216 843 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 HMGA1P17096 107 aaKnown RBP9.08□□□□□ -0.96
PALB2-202ENST00000561514 PLCG1P19174 1290 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 GABRR2P28476 465 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 LONP1P36776 959 aaKnown RBP9.08□□□□□ -0.96
PALB2-202ENST00000561514 SOX9P48436 509 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 MCM2P49736 904 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 DMWDQ09019 674 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 TMEM132DQ14C87 1099 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 ZRSR1Q15695 479 aaKnown RBP9.08□□□□□ -0.96
PALB2-202ENST00000561514 CSRP2Q16527 193 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 ARHGAP15Q53QZ3 475 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 GPR158Q5T848 1215 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 ARMCX5Q6P1M9 558 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 CRELD2Q6UXH1 353 aaPredicted RBP9.08□□□□□ -0.96
PALB2-202ENST00000561514 TMEM150AQ86TG1 271 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 WDR5BQ86VZ2 330 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 NT5DC4Q86YG4 428 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 YAF2Q8IY57 180 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 CXorf38Q8TB03 319 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 SPPL2BQ8TCT7 592 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 BPIFB1Q8TDL5 484 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 LEO1Q8WVC0 666 aaPredicted RBP9.08□□□□□ -0.96
PALB2-202ENST00000561514 RAD54LQ92698 747 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 HVCN1Q96D96 273 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 PLIN2Q99541 437 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 FAM83CQ9BQN1 747 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 ATXN3LQ9H3M9 355 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 RBM12Q9NTZ6 932 aaKnown RBP9.08□□□□□ -0.96
PALB2-202ENST00000561514 C2orf42Q9NWW7 574 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 RAB23Q9ULC3 237 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 USP18Q9UMW8 372 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 SLC27A5Q9Y2P5 690 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 TRIP11Q15643 1979 aa9.08□□□□□ -0.96
PALB2-202ENST00000561514 CITO14578 2027 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 PDCD11Q14690 1871 aaKnown RBP9.07□□□□□ -0.96
PALB2-202ENST00000561514 CHURC1-FNTBB4DL54 471 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 DYNC1I1O14576 645 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 SOAT2O75908 522 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 CD2BP2O95400 341 aaKnown RBP9.07□□□□□ -0.96
PALB2-202ENST00000561514 F11P03951 625 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 ADRB1P08588 477 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 HAPLN1P10915 354 aaPredicted RBP9.07□□□□□ -0.96
PALB2-202ENST00000561514 DDX6P26196 483 aaKnown RBP eCLIP9.07□□□□□ -0.96
PALB2-202ENST00000561514 GJB2P29033 226 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 ADSSP30520 456 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 UBA7P41226 1012 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 FNTBP49356 437 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 TAF6P49848 677 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 KPNA1P52294 538 aaPredicted RBP9.07□□□□□ -0.96
PALB2-202ENST00000561514 LIMK1P53667 647 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 GRIN1Q05586 938 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 SPEM2Q0P670 501 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 MCM6Q14566 821 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 ZNF268Q14587 947 aaPredicted RBP9.07□□□□□ -0.96
PALB2-202ENST00000561514 VEPH1Q14D04 833 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 SLC39A12Q504Y0 691 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 TMEM196Q5HYL7 178 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 MCTP1Q6DN14 999 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 SLFN12LQ6IEE8 588 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 PRR23CQ6ZRP0 262 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 BRAPQ7Z569 592 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 LRRTM3Q86VH5 581 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 EFCAB13Q8IY85 973 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 CMTM8Q8IZV2 173 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 MYCT1Q8N699 235 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 SPATA18Q8TC71 538 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 LARP4BQ92615 738 aaKnown RBP9.07□□□□□ -0.96
PALB2-202ENST00000561514 RNF25Q96BH1 459 aaPredicted RBP9.07□□□□□ -0.96
PALB2-202ENST00000561514 CALML4Q96GE6 196 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 LOXL4Q96JB6 756 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 PKMYT1Q99640 499 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 LPIN3Q9BQK8 851 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 SLC46A2Q9BY10 475 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 YY1AP1Q9H869 796 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 KIF9Q9HAQ2 790 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 ABCB6Q9NP58 842 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 HPS4Q9NQG7 708 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 SEMA4GQ9NTN9 838 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 TMEM51Q9NW97 253 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 GTSE1Q9NYZ3 720 aa9.07□□□□□ -0.96
PALB2-202ENST00000561514 MORC2Q9Y6X9 1032 aaPredicted RBP9.07□□□□□ -0.96
PALB2-202ENST00000561514 KIF26AQ9ULI4 1882 aaPredicted RBP9.06□□□□□ -0.96
PALB2-202ENST00000561514 TSC2P49815 1807 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 FRMD3A2A2Y4 597 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 TISP43B9A030 160 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 DPYSL4O14531 572 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms