RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 COLEC11Q9BWP8 271 aa20.79■□□□□ 0.92
IRF9-215ENST00000561415 LUC7LQ9NQ29 371 aaKnown RBP20.79■□□□□ 0.92
IRF9-215ENST00000561415 MARCH5Q9NX47 278 aa20.79■□□□□ 0.92
IRF9-215ENST00000561415 FAN1Q9Y2M0 1017 aa20.79■□□□□ 0.92
IRF9-215ENST00000561415 TRAPPC3O43617 180 aa20.78■□□□□ 0.92
IRF9-215ENST00000561415 VDRP11473 427 aa20.78■□□□□ 0.92
IRF9-215ENST00000561415 GZMAP12544 262 aa20.78■□□□□ 0.92
IRF9-215ENST00000561415 LMO2P25791 158 aa20.78■□□□□ 0.92
IRF9-215ENST00000561415 LHX1P48742 406 aa20.78■□□□□ 0.92
IRF9-215ENST00000561415 BCAR1P56945 870 aa20.78■□□□□ 0.92
IRF9-215ENST00000561415 TRIM72Q6ZMU5 477 aa20.78■□□□□ 0.92
IRF9-215ENST00000561415 ACOT1Q86TX2 421 aa20.78■□□□□ 0.92
IRF9-215ENST00000561415 CRYBG2Q8N1P7 616 aa20.78■□□□□ 0.92
IRF9-215ENST00000561415 HEXIM2Q96MH2 286 aaKnown RBP20.78■□□□□ 0.92
IRF9-215ENST00000561415 PCDHB8Q9UN66 801 aa20.78■□□□□ 0.92
IRF9-215ENST00000561415 PCDHGC3Q9UN70 934 aa20.78■□□□□ 0.92
IRF9-215ENST00000561415 TIMM13Q9Y5L4 95 aaPredicted RBP20.78■□□□□ 0.92
IRF9-215ENST00000561415 ATP8B3O60423 1300 aa20.78■□□□□ 0.92
IRF9-215ENST00000561415 MED7O43513 233 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 HCRTO43612 131 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 TADA2AO75478 443 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 GJB5O95377 273 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 TYMPP19971 482 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 MAGEA1P43355 309 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 SGO2Q562F6 1265 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 KIAA1328Q86T90 577 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 YME1L1Q96TA2 773 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 DNAI2Q9GZS0 605 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 DPEP3Q9H4B8 488 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 TAS2R14Q9NYV8 317 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 VWA8A3KMH1 1905 aa20.77■□□□□ 0.92
IRF9-215ENST00000561415 CEP290O15078 2479 aa20.77■□□□□ 0.91
IRF9-215ENST00000561415 A0A0U1RQJ8 604 aa20.77■□□□□ 0.91
IRF9-215ENST00000561415 GOLGA6L9A6NEM1 432 aa20.77■□□□□ 0.91
IRF9-215ENST00000561415 CYP1A1P04798 512 aaPredicted RBP20.77■□□□□ 0.91
IRF9-215ENST00000561415 CFHP08603 1231 aa20.77■□□□□ 0.91
IRF9-215ENST00000561415 PDGFRBP09619 1106 aa20.77■□□□□ 0.91
IRF9-215ENST00000561415 ALDH7A1P49419 539 aaKnown RBP20.77■□□□□ 0.91
IRF9-215ENST00000561415 BTG3Q14201 252 aaPredicted RBP20.77■□□□□ 0.91
IRF9-215ENST00000561415 ZNF662Q6ZS27 426 aa20.77■□□□□ 0.91
IRF9-215ENST00000561415 ATRIPQ8WXE1 791 aa20.77■□□□□ 0.91
IRF9-215ENST00000561415 TNIP3Q96KP6 325 aa20.77■□□□□ 0.91
IRF9-215ENST00000561415 PDCL3Q9H2J4 239 aa20.77■□□□□ 0.91
IRF9-215ENST00000561415 DDX43Q9NXZ2 648 aaKnown RBP20.77■□□□□ 0.91
IRF9-215ENST00000561415 SF3B1O75533 1304 aaKnown RBP eCLIP20.76■□□□□ 0.91
IRF9-215ENST00000561415 RCCD1A6NED2 376 aa20.76■□□□□ 0.91
IRF9-215ENST00000561415 O00370 1275 aa20.76■□□□□ 0.91
IRF9-215ENST00000561415 UNGP13051 313 aaPredicted RBP20.76■□□□□ 0.91
IRF9-215ENST00000561415 PBX3P40426 434 aa20.76■□□□□ 0.91
IRF9-215ENST00000561415 HTRA4P83105 476 aaPredicted RBP20.76■□□□□ 0.91
IRF9-215ENST00000561415 CLEC16AQ2KHT3 1053 aa20.76■□□□□ 0.91
IRF9-215ENST00000561415 TMEM173Q86WV6 379 aaPredicted RBP20.76■□□□□ 0.91
IRF9-215ENST00000561415 METTL23Q86XA0 190 aa20.76■□□□□ 0.91
IRF9-215ENST00000561415 TXLNBQ8N3L3 684 aa20.76■□□□□ 0.91
IRF9-215ENST00000561415 C12orf29Q8N999 325 aa20.76■□□□□ 0.91
IRF9-215ENST00000561415 SLC9A7Q96T83 725 aa20.76■□□□□ 0.91
IRF9-215ENST00000561415 ISCUQ9H1K1 167 aa20.76■□□□□ 0.91
IRF9-215ENST00000561415 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.76■□□□□ 0.91
IRF9-215ENST00000561415 ZNF500O60304 480 aaPredicted RBP20.75■□□□□ 0.91
IRF9-215ENST00000561415 LSM8O95777 96 aaKnown RBP20.75■□□□□ 0.91
IRF9-215ENST00000561415 NOMO3P69849 1222 aa20.75■□□□□ 0.91
IRF9-215ENST00000561415 STILQ15468 1287 aa20.75■□□□□ 0.91
IRF9-215ENST00000561415 CNGA2Q16280 664 aa20.75■□□□□ 0.91
IRF9-215ENST00000561415 PASD1Q8IV76 773 aa20.75■□□□□ 0.91
IRF9-215ENST00000561415 TNS4Q8IZW8 715 aa20.75■□□□□ 0.91
IRF9-215ENST00000561415 B3GALNT2Q8NCR0 500 aa20.75■□□□□ 0.91
IRF9-215ENST00000561415 CYFIP2Q96F07 1278 aa20.75■□□□□ 0.91
IRF9-215ENST00000561415 PACSIN1Q9BY11 444 aa20.75■□□□□ 0.91
IRF9-215ENST00000561415 LACRTQ9GZZ8 138 aa20.75■□□□□ 0.91
IRF9-215ENST00000561415 MTIF3Q9H2K0 278 aaKnown RBP20.75■□□□□ 0.91
IRF9-215ENST00000561415 NR2E3Q9Y5X4 410 aa20.75■□□□□ 0.91
IRF9-215ENST00000561415 SLC4A7Q9Y6M7 1214 aa20.75■□□□□ 0.91
IRF9-215ENST00000561415 KIAA1671Q9BY89 1806 aa20.75■□□□□ 0.91
IRF9-215ENST00000561415 TMCO5BA8MYB1 307 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 NT5C1B-RDH14C9J2C7 533 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 SYN3O14994 580 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 PJA2O43164 708 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 RTN2O75298 545 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 PCSK1P29120 753 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 SSTR3P32745 418 aaPredicted RBP20.74■□□□□ 0.91
IRF9-215ENST00000561415 CDH5P33151 784 aaPredicted RBP20.74■□□□□ 0.91
IRF9-215ENST00000561415 ARHGAP25P42331 645 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 CENPCQ03188 943 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 ELAVL2Q12926 359 aaKnown RBP20.74■□□□□ 0.91
IRF9-215ENST00000561415 OVOS1Q6IE37 1185 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 FUT10Q6P4F1 479 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 LCLAT1Q6UWP7 414 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 PHOSPHO2Q8TCD6 241 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 RTP3Q9BQQ7 232 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 LHX5Q9H2C1 402 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 INTUQ9ULD6 942 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 TFR2Q9UP52 801 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 MRPL42Q9Y6G3 142 aaKnown RBP20.74■□□□□ 0.91
IRF9-215ENST00000561415 CARNS1A5YM72 827 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 H2AFZP0C0S5 128 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 ACAT1P24752 427 aaKnown RBP20.74■□□□□ 0.91
IRF9-215ENST00000561415 TKTP29401 623 aaKnown RBP20.74■□□□□ 0.91
IRF9-215ENST00000561415 YWHAHQ04917 246 aaPredicted RBP20.74■□□□□ 0.91
IRF9-215ENST00000561415 KIF5AQ12840 1032 aa20.74■□□□□ 0.91
IRF9-215ENST00000561415 ARHGAP29Q52LW3 1261 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms