RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	UBXN1	Q04323	297 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	SMARCB1	Q12824	385 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	SMC1A	Q14683	1233 aa	Known RBP	10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	ZNF280D	Q6N043	979 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	TRIM65	Q6PJ69	517 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	SARM1	Q6SZW1	724 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	UNC93A	Q86WB7	457 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	TMEM173	Q86WV6	379 aa	Predicted RBP	10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	VPS52	Q8N1B4	723 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	THEM5	Q8N1Q8	247 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	LMO3	Q8TAP4	145 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	POF1B	Q8WVV4	589 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	ARNTL2	Q8WYA1	636 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	MRPL38	Q96DV4	380 aa	Known RBP	10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	BCO2	Q9BYV7	579 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	GPR62	Q9BZJ7	368 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	INTS2	Q9H0H0	1204 aa	Known RBP	10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	ZBP1	Q9H171	429 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	SLC24A3	Q9HC58	644 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	FNIP2	Q9P278	1114 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	APEX2	Q9UBZ4	518 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	FBXL5	Q9UKA1	691 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	MAFF	Q9ULX9	164 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	BACE2	Q9Y5Z0	518 aa		10.6	□□□□□ -0.71
KNSTRN-215	ENST00000561367	GBF1	Q92538	1859 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	LAMA2	P24043	3122 aa	Known RBP	10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	FAM187A	A6NFU0	413 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	OR6C75	A6NL08	312 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	RBAK-RBAKDN	I3L0D1	243 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	GABRD	O14764	452 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	PPEF2	O14830	753 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	SPTLC1	O15269	473 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	CLSTN1	O94985	981 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	ARHGEF15	O94989	841 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	JUND	P17535	347 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	WARS	P23381	471 aa	Known RBP	10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	PON1	P27169	355 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	PCSK1	P29120	753 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	BRCC3	P46736	316 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	MFAP3	P55082	362 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	MRPL58	Q14197	206 aa	Known RBP	10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	NR1I3	Q14994	352 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	KIAA0319	Q5VV43	1072 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	OVOS1	Q6IE37	1185 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	ELMSAN1	Q6PJG2	1045 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	RTL10	Q7L3V2	364 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	TMC7	Q7Z402	723 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	RETREG3	Q86VR2	466 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	PPFIBP1	Q86W92	1011 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	RNF214	Q8ND24	703 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	HASPIN	Q8TF76	798 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	SEMA4D	Q92854	862 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	MMS19	Q96T76	1030 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	ACBD6	Q9BR61	282 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	EMILIN2	Q9BXX0	1053 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	RXFP1	Q9HBX9	757 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	ENTPD7	Q9NQZ7	604 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	NXF1	Q9UBU9	619 aa	Known RBP	10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	DPP7	Q9UHL4	492 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	MTUS1	Q9ULD2	1270 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	TRIP11	Q15643	1979 aa		10.59	□□□□□ -0.71
KNSTRN-215	ENST00000561367	NLRC5	Q86WI3	1866 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367		F8W810	466 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	FSCN2	O14926	492 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	ZBTB24	O43167	697 aa	Predicted RBP	10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	ASPA	P45381	313 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	NDUFV1	P49821	464 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	INCA1	Q0VD86	236 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	CUL2	Q13617	745 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	MAPRE1	Q15691	268 aa	Known RBP	10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	SOWAHA	Q2M3V2	549 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	FIGN	Q5HY92	759 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	SLC8B1	Q6J4K2	584 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	CEP57	Q86XR8	500 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	ADGRF2	Q8IZF7	708 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	PPM1K	Q8N3J5	372 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	PDCL2	Q8N4E4	241 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	MRPL43	Q8N983	215 aa	Known RBP	10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	C2orf15	Q8WU43	125 aa	Known RBP	10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	RABGGTA	Q92696	567 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	TNIP3	Q96KP6	325 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	CDCA3	Q99618	268 aa	Predicted RBP	10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	TCF25	Q9BQ70	676 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	NUP58	Q9BVL2	599 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	VN1R3	Q9BXE9	311 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	EDEM3	Q9BZQ6	932 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	RBSN	Q9H1K0	784 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	SNX25	Q9H3E2	840 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	ALG13	Q9NP73	1137 aa	Known RBP	10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	TOR4A	Q9NXH8	423 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	HSFX1	Q9UBD0	423 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	MTRR	Q9UBK8	725 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	CACNG4	Q9UBN1	327 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	KIAA1257	Q9ULG3	409 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	L1RE1	Q9UN81	338 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	LAMA3	Q16787	3333 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	KIAA1671	Q9BY89	1806 aa		10.58	□□□□□ -0.72
KNSTRN-215	ENST00000561367	CHD9	Q3L8U1	2897 aa		10.57	□□□□□ -0.72

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