RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TAF12Q16514 161 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 C8orf34Q49A92 452 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 SLC39A12Q504Y0 691 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 PPM1JQ5JR12 505 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 SLFN12LQ6IEE8 588 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 CEP68Q76N32 757 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 CMTM8Q8IZV2 173 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 DDX1Q92499 740 aaKnown RBP12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 LOXL4Q96JB6 756 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 GCNAQ96QF7 691 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 FAM83CQ9BQN1 747 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 ST6GALNAC4Q9H4F1 302 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 STYXL1Q9Y6J8 313 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 SPTBN2O15020 2390 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 TPRP12270 2363 aaKnown RBP12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 TSC2P49815 1807 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 CACNA1BQ00975 2339 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 ANKRD63C9JTQ0 380 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 CYB561D2O14569 222 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 ATG13O75143 517 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 KRT18P05783 430 aaKnown RBP12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 HAPLN1P10915 354 aaPredicted RBP12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 DDX6P26196 483 aaKnown RBP eCLIP12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 ACOT2P49753 483 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 TAF6P49848 677 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 LIMK1P53667 647 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 DHX8Q14562 1220 aaKnown RBP12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 TMEM196Q5HYL7 178 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 ADALQ6DHV7 355 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 LRRTM3Q86VH5 581 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 LRRC15Q8TF66 581 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 GAB3Q8WWW8 586 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 PYM1Q9BRP8 204 aaKnown RBP12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 GKN1Q9NS71 199 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 DPP3Q9NY33 737 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 SCN1AP35498 2009 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 RALGAPA1Q6GYQ0 2036 aa12.78□□□□□ -0.36
CARMIL3-204ENST00000561354 ANK1P16157 1881 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 KIF26AQ9ULI4 1882 aaPredicted RBP12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 H3BQV1 296 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 TRDMT1O14717 391 aaKnown RBP12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 EXTL3O43909 919 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 GDF9O60383 454 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 TBCAO75347 108 aaKnown RBP12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 KRT37O76014 449 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 BMP15O95972 392 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 F11P03951 625 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 HMGA1P17096 107 aaKnown RBP12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 NMT1P30419 496 aaKnown RBP12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 NLRP12P59046 1061 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 AMPD2Q01433 879 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 GRSF1Q12849 480 aaKnown RBP eCLIP12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 RUNX3Q13761 415 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 MCM6Q14566 821 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 WSCD1Q658N2 575 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 TMEM150AQ86TG1 271 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 NT5DC4Q86YG4 428 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 DCP1BQ8IZD4 617 aaKnown RBP12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 GIPC2Q8TF65 315 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 RAD54LQ92698 747 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 SMG9Q9H0W8 520 aaKnown RBP12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 ZHX3Q9H4I2 956 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 KIF9Q9HAQ2 790 aa12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 AGO2Q9UKV8 859 aaKnown RBP12.77□□□□□ -0.37
CARMIL3-204ENST00000561354 KPNA7A9QM74 516 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 RPP40O75818 363 aaKnown RBP12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 AKAP3O75969 853 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 ZNF806P0C7X5 589 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 PLCG1P19174 1290 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 GJB2P29033 226 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 HOXC13P31276 330 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 LONP1P36776 959 aaKnown RBP12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 AVPR1AP37288 418 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 RAP1GAPP47736 663 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 POSTNQ15063 836 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 RABEP1Q15276 862 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 NFE2Q16621 373 aaPredicted RBP12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 SV2CQ496J9 727 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 ZC2HC1CQ53FD0 456 aaPredicted RBP12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 FSTL4Q6MZW2 842 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 PKN3Q6P5Z2 889 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 CRELD2Q6UXH1 353 aaPredicted RBP12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 CACNA2D4Q7Z3S7 1137 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 MON1AQ86VX9 555 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 CAMKK1Q8N5S9 505 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 MAB21L3Q8N8X9 362 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 LARP4BQ92615 738 aaKnown RBP12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 USP13Q92995 863 aaPredicted RBP12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 HVCN1Q96D96 273 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 CHFRQ96EP1 664 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 IPO9Q96P70 1041 aaKnown RBP12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 HPS4Q9NQG7 708 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 TDP1Q9NUW8 608 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 ABI2Q9NYB9 513 aaPredicted RBP12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 PCDHB5Q9Y5E4 795 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 ACACBO00763 2458 aa12.76□□□□□ -0.37
CARMIL3-204ENST00000561354 OTOL1A6NHN0 477 aaPredicted RBP12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 TISP43B9A030 160 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 TM4SF5O14894 197 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 AXIN1O15169 862 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms