RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 SLITRK6Q9H5Y7 841 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 DNMT3BQ9UBC3 853 aaKnown RBP10.85□□□□□ -0.67
HERC1-212ENST00000561348 GTF3C4Q9UKN8 822 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 MAGED2Q9UNF1 606 aaPredicted RBP10.85□□□□□ -0.67
HERC1-212ENST00000561348 YIPF1Q9Y548 306 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 C19orf67A6NJJ6 358 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 A8MXQ7 604 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 HLA-DRAP01903 254 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 RHOP08100 348 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 ALADP13716 330 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 CCNE1P24864 410 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 LMO2P25791 158 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 PCSK1P29120 753 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 GNL1P36915 607 aaPredicted RBP10.84□□□□□ -0.67
HERC1-212ENST00000561348 LHX1P48742 406 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 AP3M2P53677 418 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 CDH8P55286 799 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 FKBP3Q00688 224 aaKnown RBP10.84□□□□□ -0.67
HERC1-212ENST00000561348 MORC3Q14149 939 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 VEPH1Q14D04 833 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 TPD52L1Q16890 204 aaPredicted RBP10.84□□□□□ -0.67
HERC1-212ENST00000561348 CCDC142Q17RM4 750 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 EDRF1Q3B7T1 1238 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 SDHAF4Q5VUM1 108 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 CENPPQ6IPU0 288 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 SPOPLQ6IQ16 392 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 PDZD4Q76G19 769 aaPredicted RBP10.84□□□□□ -0.67
HERC1-212ENST00000561348 SV2AQ7L0J3 742 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 GPIHBP1Q8IV16 184 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 TOP6BLQ8N6T0 577 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 STKLD1Q8NE28 680 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 TTC16Q8NEE8 873 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 ITFG1Q8TB96 612 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 TMC2Q8TDI7 906 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 RSAD2Q8WXG1 361 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 SPOCK2Q92563 424 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 DHTKD1Q96HY7 919 aaPredicted RBP10.84□□□□□ -0.67
HERC1-212ENST00000561348 LPIN3Q9BQK8 851 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 RTP3Q9BQQ7 232 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 MED10Q9BTT4 135 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 RHOBTB2Q9BYZ6 727 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 GTPBP4Q9BZE4 634 aaKnown RBP10.84□□□□□ -0.67
HERC1-212ENST00000561348 GZF1Q9H116 711 aaPredicted RBP10.84□□□□□ -0.67
HERC1-212ENST00000561348 CRISPLD1Q9H336 500 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 SMOC2Q9H3U7 446 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 CLSTN2Q9H4D0 955 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 LMBRD1Q9NUN5 540 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 TMLHEQ9NVH6 421 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 GDAP2Q9NXN4 497 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 KIAA1468Q9P260 1216 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 PCDHB5Q9Y5E4 795 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 NCOR1O75376 2440 aa10.84□□□□□ -0.67
HERC1-212ENST00000561348 BICDL2A1A5D9 508 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 MYBPHLA2RUH7 354 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 VNN1O95497 513 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 C4BPAP04003 597 aaKnown RBP10.83□□□□□ -0.68
HERC1-212ENST00000561348 P4HA1P13674 534 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 CYP2F1P24903 491 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 ATICP31939 592 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 GPR15P49685 360 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 LRRC63Q05C16 580 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 PPP3CAQ08209 521 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 LRMPQ12912 555 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 PAK1Q13153 545 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 PLD1Q13393 1074 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 ORC1Q13415 861 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 SGSM1Q2NKQ1 1148 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 ZCWPW2Q504Y3 356 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 MDH1BQ5I0G3 518 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 INTS6LQ5JSJ4 861 aaKnown RBP10.83□□□□□ -0.68
HERC1-212ENST00000561348 CYP26C1Q6V0L0 522 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 PIP4P2Q8N4L2 257 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 CXorf38Q8TB03 319 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 SPATA20Q8TB22 786 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 TAS1R2Q8TE23 839 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 FGF13Q92913 245 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 TCEAL4Q96EI5 215 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 SYT15Q9BQS2 421 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 SMYD3Q9H7B4 428 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 ASAH2Q9NR71 780 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 CEP72Q9P209 647 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 ARMCX3Q9UH62 379 aaPredicted RBP10.83□□□□□ -0.68
HERC1-212ENST00000561348 MYO10Q9HD67 2058 aa10.83□□□□□ -0.68
HERC1-212ENST00000561348 TSC2P49815 1807 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 PPP1R3GB7ZBB8 358 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 STK25O00506 426 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 IKBKBO14920 756 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 STX10O60499 249 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 N4BP1O75113 896 aaKnown RBP10.82□□□□□ -0.68
HERC1-212ENST00000561348 VNN2O95498 520 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 C1RP00736 705 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 CEBPBP17676 345 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 CD58P19256 250 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 BMP6P22004 513 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 HOXA9P31269 272 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 GRIK1P39086 918 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 PPP1R2P41236 205 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 TUFMP49411 452 aaKnown RBP10.82□□□□□ -0.68
HERC1-212ENST00000561348 MXI1P50539 228 aa10.82□□□□□ -0.68
HERC1-212ENST00000561348 IFRD2Q12894 506 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms