RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 ACBD6Q9BR61 282 aa10.99□□□□□ -0.65
LRRC28-221ENST00000561276 OXCT2Q9BYC2 517 aaPredicted RBP10.99□□□□□ -0.65
LRRC28-221ENST00000561276 NSUN3Q9H649 340 aaKnown RBP10.99□□□□□ -0.65
LRRC28-221ENST00000561276 IGFLR1Q9H665 355 aa10.99□□□□□ -0.65
LRRC28-221ENST00000561276 SIX2Q9NPC8 291 aa10.99□□□□□ -0.65
LRRC28-221ENST00000561276 IFNKQ9P0W0 207 aa10.99□□□□□ -0.65
LRRC28-221ENST00000561276 APEX2Q9UBZ4 518 aa10.99□□□□□ -0.65
LRRC28-221ENST00000561276 STXBP5LQ9Y2K9 1186 aa10.99□□□□□ -0.65
LRRC28-221ENST00000561276 OR6C75A6NL08 312 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 A8MXQ7 604 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 HCRTO43612 131 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 ADH1AP07327 375 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 OR4Q2P0C623 313 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 CD58P19256 250 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 TBXAS1P24557 533 aaPredicted RBP10.98□□□□□ -0.65
LRRC28-221ENST00000561276 GTF2F1P35269 517 aaKnown RBP eCLIP10.98□□□□□ -0.65
LRRC28-221ENST00000561276 NRIP1P48552 1158 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 NDUFV1P49821 464 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 KLK7P49862 253 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 MFAP3P55082 362 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 PLCB2Q00722 1185 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 GCNT1Q02742 428 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 RAB33AQ14088 237 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 SYCP1Q15431 976 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 PTPN21Q16825 1174 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 KLHDC7AQ5VTJ3 777 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 SLC8B1Q6J4K2 584 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 GJB7Q6PEY0 223 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 LRRTM3Q86VH5 581 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 OR10T2Q8NGX3 314 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 ZNF461Q8TAF7 563 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 PCMTD1Q96MG8 357 aaPredicted RBP10.98□□□□□ -0.65
LRRC28-221ENST00000561276 CISHQ9NSE2 258 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 DNAJC12Q9UKB3 198 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 SIK3Q9Y2K2 1263 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 NME7Q9Y5B8 376 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 MYO9BQ13459 2157 aa10.98□□□□□ -0.65
LRRC28-221ENST00000561276 REV3LO60673 3130 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 CLASP2O75122 1294 aaKnown RBP10.97□□□□□ -0.65
LRRC28-221ENST00000561276 ATP2C2O75185 946 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 NOL4O94818 638 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 ABLIM3O94929 683 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 SPATA31D3P0C874 917 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 CPB1P15086 417 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 PTPN1P18031 435 aaKnown RBP10.97□□□□□ -0.65
LRRC28-221ENST00000561276 PCSK1P29120 753 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 CDR1P51861 262 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 NDST1P52848 882 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 YWHAEP62258 255 aaKnown RBP10.97□□□□□ -0.65
LRRC28-221ENST00000561276 ROR1Q01973 937 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 INCA1Q0VD86 236 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 HYAL1Q12794 435 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 GPR17Q13304 367 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 CCDC85BQ15834 202 aaPredicted RBP10.97□□□□□ -0.65
LRRC28-221ENST00000561276 DUSP6Q16828 381 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 ARHGAP44Q17R89 818 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 UVSSAQ2YD98 709 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 SLC39A12Q504Y0 691 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 ZNF394Q53GI3 561 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 TCEAL5Q5H9L2 206 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 LILRA6Q6PI73 481 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 RNF19BQ6ZMZ0 732 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 SPATA31D4Q6ZUB0 917 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 ENOSF1Q7L5Y1 443 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 ACOT1Q86TX2 421 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 PPFIBP1Q86W92 1011 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 UNC93AQ86WB7 457 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 DCP1BQ8IZD4 617 aaKnown RBP10.97□□□□□ -0.65
LRRC28-221ENST00000561276 CRYBG2Q8N1P7 616 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 MICALL1Q8N3F8 863 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 TTC39CQ8N584 583 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 WHAMMQ8TF30 809 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 KAT5Q92993 513 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 PPP2R3CQ969Q6 453 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 FAM81BQ96LP2 452 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 KREMEN1Q96MU8 473 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 LPIN3Q9BQK8 851 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 LSM14BQ9BX40 385 aaKnown RBP10.97□□□□□ -0.65
LRRC28-221ENST00000561276 XPO4Q9C0E2 1151 aaKnown RBP10.97□□□□□ -0.65
LRRC28-221ENST00000561276 ZCWPW1Q9H0M4 648 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 FAM124BQ9H5Z6 455 aaPredicted RBP10.97□□□□□ -0.65
LRRC28-221ENST00000561276 PLCB1Q9NQ66 1216 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 GTF3C4Q9UKN8 822 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 CDH9Q9ULB4 789 aa10.97□□□□□ -0.65
LRRC28-221ENST00000561276 BARX2Q9UMQ3 279 aaPredicted RBP10.97□□□□□ -0.65
LRRC28-221ENST00000561276 MYH10P35580 1976 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 A0A1W2PQC6 194 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 WDR27A2RRH5 827 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 MYBPHLA2RUH7 354 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 RNF225M0QZC1 329 aaPredicted RBP10.96□□□□□ -0.65
LRRC28-221ENST00000561276 AP5Z1O43299 807 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 TGM5O43548 720 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 CILPO75339 1184 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 ATF2P15336 505 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 UCHL3P15374 230 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 FOSL2P15408 326 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 ACO1P21399 889 aaKnown RBP10.96□□□□□ -0.65
LRRC28-221ENST00000561276 CLCN4P51793 760 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 TSPY1Q01534 308 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 ORC1Q13415 861 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms