RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 LANCL2Q9NS86 450 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 SPATA6Q9NWH7 488 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 HPF1Q9NWY4 346 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 UCKL1Q9NWZ5 548 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 ALKBH4Q9NXW9 302 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 MRPL15Q9P015 296 aaKnown RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 COL20A1Q9P218 1284 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 CFAP97Q9P2B7 532 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 WDR35Q9P2L0 1181 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 MORF4L1Q9UBU8 362 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 FBXL7Q9UJT9 491 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 NUDT5Q9UKK9 219 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 ZMYND8Q9ULU4 1186 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 PPIEQ9UNP9 301 aaKnown RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 C19orf53Q9UNZ5 99 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 PA2G4Q9UQ80 394 aaKnown RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 MTF2Q9Y483 593 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 DTNAQ9Y4J8 743 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 X6R8D5 127 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PASKQ96RG2 1323 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 MYBBP1AQ9BQG0 1328 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 FAM95CA0A1B0GW59 222 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 FAM90A27PA6NNH2 459 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 BTBD11A6QL63 1104 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 MYO1GB0I1T2 1018 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TMEM232C9JQI7 657 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 H0Y626 953 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 H3BM21 787 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 DDX39AO00148 427 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 PEX12O00623 359 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TNPO2O14787 897 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 KIAA0355O15063 1070 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TEX33O43247 280 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 CUTAO60888 179 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 OPHN1O60890 802 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 PPP6R2O75170 966 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 PPFIA2O75334 1257 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 GPR32O75388 356 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 FAM155BO75949 473 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 WFS1O76024 890 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 PAPLNO95428 1278 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 SGPL1O95470 568 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 METTL18O95568 372 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 EOMESO95936 686 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 AHSGP02765 367 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 MT-ND3P03897 115 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 KRT1P04264 644 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 FAM87AP0C7U9 286 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TXNP10599 105 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 XRCC6P12956 609 aaKnown RBP eCLIP2.22□□□□□ -2.05
RTF1-207ENST00000561076 KRT13P13646 458 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 HNRNPLP14866 589 aaKnown RBP eCLIP2.22□□□□□ -2.05
RTF1-207ENST00000561076 TACR1P25103 407 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 CTSSP25774 331 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 MAPK3P27361 379 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 APEX1P27695 318 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 SERPINA4P29622 427 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 MCM7P33993 719 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 PTPN7P35236 360 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 THPOP40225 353 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 CPA2P48052 419 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 AMPHP49418 695 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 HARS2P49590 506 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 RGS3P49796 1198 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 SH3BGRP55822 239 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 NLRP5P59047 1200 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 POLR2FP61218 127 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 RPS3AP61247 264 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 PRAMEP78395 509 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 AKAP17AQ02040 695 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 MEF2AQ02078 507 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 EXOSC9Q06265 439 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 EGR3Q06889 387 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TNK2Q07912 1038 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 KIAA2012Q0VF49 1180 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TFCP2Q12800 502 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TRIM28Q13263 835 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 CAMK1Q14012 370 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 ARHGEF7Q14155 803 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 MYBPC3Q14896 1274 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 NOLC1Q14978 699 aaKnown RBP eCLIP2.22□□□□□ -2.05
RTF1-207ENST00000561076 TBCEQ15813 527 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 BAK1Q16611 211 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 DGKDQ16760 1214 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 AOC3Q16853 763 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 C2orf76Q3KRA6 126 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 PARP10Q53GL7 1025 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TCP11X2Q5H9J9 407 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 HABP4Q5JVS0 413 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 CACHD1Q5VU97 1274 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 SNX30Q5VWJ9 437 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 BICRALQ6AI39 1079 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 MRNIPQ6NTE8 343 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 CRTC1Q6UUV9 634 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 IL27RAQ6UWB1 636 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 OLFM4Q6UX06 510 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 UNQ6494/PRO21346Q6UXR6 183 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 SYNE3Q6ZMZ3 975 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 SLCO4C1Q6ZQN7 724 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms