RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 POLR2BP30876 1174 aaKnown RBP17.47■□□□□ 0.39
SNX1-213ENST00000561026 ARHGAP15Q53QZ3 475 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 GPR158Q5T848 1215 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 MAMSTRQ6ZN01 415 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 CSGALNACT2Q8N6G5 542 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 SUMF1Q8NBK3 374 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 CXorf38Q8TB03 319 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 ATRIPQ8WXE1 791 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 NELL1Q92832 810 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 LRRC3BQ96PB8 259 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 TNMDQ9H2S6 317 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 CHRDQ9H2X0 955 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 PCIF1Q9H4Z3 704 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 IL21Q9HBE4 155 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 PRMT8Q9NR22 394 aaPredicted RBP17.47■□□□□ 0.39
SNX1-213ENST00000561026 KBTBD4Q9NVX7 518 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 OBP2AQ9NY56 170 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 ABI2Q9NYB9 513 aaPredicted RBP17.47■□□□□ 0.39
SNX1-213ENST00000561026 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
SNX1-213ENST00000561026 PCDHGA2Q9Y5H1 932 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 FANCMQ8IYD8 2048 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 DPYSL4O14531 572 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 PPP6R2O75170 966 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 CCNE1P24864 410 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 CDC25CP30307 473 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 E2F4Q16254 413 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 TAF12Q16514 161 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 SCARA3Q6AZY7 606 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 PDCL2Q8N4E4 241 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 LRRC52Q8N7C0 313 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 ZBTB44Q8NCP5 570 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 CSGALNACT1Q8TDX6 532 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 GIPC2Q8TF65 315 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 ZNF396Q96N95 335 aaPredicted RBP17.46■□□□□ 0.39
SNX1-213ENST00000561026 LRRC27Q9C0I9 530 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 TASP1Q9H6P5 420 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 LMAN1LQ9HAT1 526 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 PDE11AQ9HCR9 933 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 ZSCAN32Q9NX65 697 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 ITGA11Q9UKX5 1188 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 PCDHB5Q9Y5E4 795 aa17.46■□□□□ 0.39
SNX1-213ENST00000561026 DMXL1Q9Y485 3027 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 PATJQ8NI35 1801 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 KIAA0391O15091 583 aaKnown RBP17.45■□□□□ 0.38
SNX1-213ENST00000561026 HUS1O60921 280 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 TSPY1Q01534 308 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 C1orf228Q6PIY5 440 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 TSSK4Q6SA08 328 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 STXBP4Q6ZWJ1 553 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 GPD1LQ8N335 351 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 GLIS3Q8NEA6 775 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 NOC3LQ8WTT2 800 aaKnown RBP17.45■□□□□ 0.38
SNX1-213ENST00000561026 RUBCNQ92622 972 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 SNX21Q969T3 373 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 MSANTD3Q96H12 275 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 FAM84AQ96KN4 292 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 GCNAQ96QF7 691 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 ACBD6Q9BR61 282 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 IER2Q9BTL4 223 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 TRIM9Q9C026 710 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 CUEDC2Q9H467 287 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 TMLHEQ9NVH6 421 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 GDAP2Q9NXN4 497 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 L1RE1Q9UN81 338 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 COL4A2P08572 1712 aa17.45■□□□□ 0.38
SNX1-213ENST00000561026 YEATS4O95619 227 aa17.44■□□□□ 0.38
SNX1-213ENST00000561026 CHRNB1P11230 501 aa17.44■□□□□ 0.38
SNX1-213ENST00000561026 KPNA1P52294 538 aaPredicted RBP17.44■□□□□ 0.38
SNX1-213ENST00000561026 RBP5P82980 135 aa17.44■□□□□ 0.38
SNX1-213ENST00000561026 CYP4F8P98187 520 aa17.44■□□□□ 0.38
SNX1-213ENST00000561026 AMPD3Q01432 767 aa17.44■□□□□ 0.38
SNX1-213ENST00000561026 NFE2Q16621 373 aaPredicted RBP17.44■□□□□ 0.38
SNX1-213ENST00000561026 ARHGAP29Q52LW3 1261 aa17.44■□□□□ 0.38
SNX1-213ENST00000561026 TMEM86AQ8N2M4 240 aa17.44■□□□□ 0.38
SNX1-213ENST00000561026 HPS3Q969F9 1004 aa17.44■□□□□ 0.38
SNX1-213ENST00000561026 SLC46A2Q9BY10 475 aa17.44■□□□□ 0.38
SNX1-213ENST00000561026 FAM126AQ9BYI3 521 aaPredicted RBP17.44■□□□□ 0.38
SNX1-213ENST00000561026 MTMR12Q9C0I1 747 aa17.44■□□□□ 0.38
SNX1-213ENST00000561026 C8orf33Q9H7E9 229 aaPredicted RBP17.44■□□□□ 0.38
SNX1-213ENST00000561026 DDX43Q9NXZ2 648 aaKnown RBP17.44■□□□□ 0.38
SNX1-213ENST00000561026 SIX4Q9UIU6 781 aa17.44■□□□□ 0.38
SNX1-213ENST00000561026 TICRRQ7Z2Z1 1910 aa17.44■□□□□ 0.38
SNX1-213ENST00000561026 SLC38A8A6NNN8 435 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 LILRB5O75023 590 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 PRAMEF12O95522 483 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 KRT19P08727 400 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 HMGA1P17096 107 aaKnown RBP17.43■□□□□ 0.38
SNX1-213ENST00000561026 HOXD13P35453 343 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 BFSP1Q12934 665 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 CNNM4Q6P4Q7 775 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 SHC4Q6S5L8 630 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 TMEM150AQ86TG1 271 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 IQUBQ8NA54 791 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 BPIFB1Q8TDL5 484 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 LEO1Q8WVC0 666 aaPredicted RBP17.43■□□□□ 0.38
SNX1-213ENST00000561026 DHX58Q96C10 678 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 ZFYVE19Q96K21 471 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 HINFPQ9BQA5 517 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 PI4K2AQ9BTU6 479 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 ZMYM5Q9UJ78 669 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms