RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 SQORQ9Y6N5 450 aa8.63□□□□□ -1.03
CPNE6-218ENST00000560845 CFAP54Q96N23 3096 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 ABL1P00519 1130 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 ITGB3P05106 788 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 KRT19P08727 400 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 KRT5P13647 590 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 ZSCAN20P17040 1043 aaPredicted RBP8.62□□□□□ -1.03
CPNE6-218ENST00000560845 USP8P40818 1118 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 RAB27AP51159 221 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 VCPP55072 806 aaKnown RBP8.62□□□□□ -1.03
CPNE6-218ENST00000560845 MYL6P60660 151 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 SIGLEC14Q08ET2 396 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 SGSM1Q2NKQ1 1148 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 ASTE1Q2TB18 679 aaPredicted RBP8.62□□□□□ -1.03
CPNE6-218ENST00000560845 SPOPLQ6IQ16 392 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 IRF2BP2Q7Z5L9 587 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 KIAA1328Q86T90 577 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 FAM71AQ8IYT1 594 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 C1orf127Q8N9H9 656 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 SMG8Q8ND04 991 aaKnown RBP8.62□□□□□ -1.03
CPNE6-218ENST00000560845 BEST2Q8NFU1 509 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 SUSD6Q92537 303 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 TAF4BQ92750 862 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 TATDN2Q93075 761 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 ELMO3Q96BJ8 720 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 RPGRIP1Q96KN7 1286 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 TSPAN18Q96SJ8 248 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.62□□□□□ -1.03
CPNE6-218ENST00000560845 IRX2Q9BZI1 471 aaPredicted RBP8.62□□□□□ -1.03
CPNE6-218ENST00000560845 TLE6Q9H808 572 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 APOBEC3GQ9HC16 384 aaKnown RBP8.62□□□□□ -1.03
CPNE6-218ENST00000560845 LUC7LQ9NQ29 371 aaKnown RBP8.62□□□□□ -1.03
CPNE6-218ENST00000560845 FAM105AQ9NUU6 356 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 FAM86C1Q9NVL1 165 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 PARP2Q9UGN5 583 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 SIX4Q9UIU6 781 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 ITGA11Q9UKX5 1188 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 LRFN2Q9ULH4 789 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 PADI3Q9ULW8 664 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 UBQLN1Q9UMX0 589 aaKnown RBP8.62□□□□□ -1.03
CPNE6-218ENST00000560845 NUB1Q9Y5A7 615 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 PCDHB2Q9Y5E7 798 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 MRFAP1Q9Y605 127 aa8.62□□□□□ -1.03
CPNE6-218ENST00000560845 ZFHX2Q9C0A1 2572 aaPredicted RBP8.61□□□□□ -1.03
CPNE6-218ENST00000560845 FOXN3O00409 490 aaPredicted RBP8.61□□□□□ -1.03
CPNE6-218ENST00000560845 PER2O15055 1255 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 XPOTO43592 962 aaKnown RBP8.61□□□□□ -1.03
CPNE6-218ENST00000560845 GFRA3O60609 400 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 LCA5LO95447 670 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 ITGA4P13612 1032 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 ATF7P17544 494 aaPredicted RBP8.61□□□□□ -1.03
CPNE6-218ENST00000560845 IBSPP21815 317 aaPredicted RBP8.61□□□□□ -1.03
CPNE6-218ENST00000560845 AKAP5P24588 427 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 POLR2BP30876 1174 aaKnown RBP8.61□□□□□ -1.03
CPNE6-218ENST00000560845 ATICP31939 592 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 PDE6CP51160 858 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 GUCY2FP51841 1108 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 VAV2P52735 878 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 GNG11P61952 73 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 YWHAEP62258 255 aaKnown RBP8.61□□□□□ -1.03
CPNE6-218ENST00000560845 UBE3AQ05086 875 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 PTK2Q05397 1052 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 GFPT1Q06210 699 aaPredicted RBP8.61□□□□□ -1.03
CPNE6-218ENST00000560845 DSC3Q14574 896 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 SLC18A3Q16572 532 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 ERCC6LQ2NKX8 1250 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 ARHGAP29Q52LW3 1261 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 ZNF667Q5HYK9 610 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 GLRA4Q5JXX5 417 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 SCARA5Q6ZMJ2 495 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 RSRC2Q7L4I2 434 aaKnown RBP8.61□□□□□ -1.03
CPNE6-218ENST00000560845 ZNF571Q7Z3V5 609 aaPredicted RBP8.61□□□□□ -1.03
CPNE6-218ENST00000560845 TXLNBQ8N3L3 684 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 VN1R2Q8NFZ6 395 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 JAKMIP2Q96AA8 810 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 ASIC4Q96FT7 647 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 ZMAT2Q96NC0 199 aaKnown RBP8.61□□□□□ -1.03
CPNE6-218ENST00000560845 RPS6KC1Q96S38 1066 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 ARID3AQ99856 593 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 CARD6Q9BX69 1037 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 TSGA10Q9BZW7 698 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 XYLT2Q9H1B5 865 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 TLR9Q9NR96 1032 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 ZNF446Q9NWS9 450 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 DPP3Q9NY33 737 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 TUBGCP4Q9UGJ1 667 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 PCDHB12Q9Y5F1 795 aa8.61□□□□□ -1.03
CPNE6-218ENST00000560845 ATP8B3O60423 1300 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 ANK1P16157 1881 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 A0A087X0T9 212 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 ZNF263O14978 683 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 CYP26A1O43174 497 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 MGEA5O60502 916 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 FGF18O76093 207 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 STAU1O95793 577 aaKnown RBP8.6□□□□□ -1.03
CPNE6-218ENST00000560845 CST3P01034 146 aaPredicted RBP8.6□□□□□ -1.03
CPNE6-218ENST00000560845 FAM228BP0C875 321 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 P4HA1P13674 534 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 KCNE1P15382 129 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 ACO1P21399 889 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms