RNA–Protein interactions for RNA: ENST00000560808.1

NEO1-211, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 1,046 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-211ENST00000560808 CEP250Q9BV73 2442 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 KPNA7A9QM74 516 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 K7ESF4 209 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 PRAMEF12O95522 483 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 HAPLN1P10915 354 aaPredicted RBP10.32□□□□□ -0.76
NEO1-211ENST00000560808 ATF6P18850 670 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 ADSSP30520 456 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 CNR2P34972 360 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 TAF6P49848 677 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 CYP4F8P98187 520 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 PLCB2Q00722 1185 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 POU5F1Q01860 360 aaKnown RBP10.32□□□□□ -0.76
NEO1-211ENST00000560808 PTPAQ15257 358 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 ITPRIPL2Q3MIP1 535 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 WDR44Q5JSH3 913 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 CRELD2Q6UXH1 353 aaPredicted RBP10.32□□□□□ -0.76
NEO1-211ENST00000560808 USP49Q70CQ1 688 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 DYMQ7RTS9 669 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 BRAPQ7Z569 592 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 LONP2Q86WA8 852 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 DCP1BQ8IZD4 617 aaKnown RBP10.32□□□□□ -0.76
NEO1-211ENST00000560808 CMTM8Q8IZV2 173 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 SYNPOQ8N3V7 929 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 C2orf15Q8WU43 125 aaKnown RBP10.32□□□□□ -0.76
NEO1-211ENST00000560808 LARP4BQ92615 738 aaKnown RBP10.32□□□□□ -0.76
NEO1-211ENST00000560808 EPSTI1Q96J88 318 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 RTKNQ9BST9 563 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 CCSER1Q9C0I3 900 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 ST6GALNAC4Q9H4F1 302 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 C2orf42Q9NWW7 574 aa10.32□□□□□ -0.76
NEO1-211ENST00000560808 ABI2Q9NYB9 513 aaPredicted RBP10.32□□□□□ -0.76
NEO1-211ENST00000560808 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.32□□□□□ -0.76
NEO1-211ENST00000560808 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.31□□□□□ -0.76
NEO1-211ENST00000560808 IL18RAPO95256 599 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 PAPSS2O95340 614 aaPredicted RBP10.31□□□□□ -0.76
NEO1-211ENST00000560808 HOXA6P31267 233 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 HOXC13P31276 330 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 AVPR1AP37288 418 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 TFAMQ00059 246 aaKnown RBP10.31□□□□□ -0.76
NEO1-211ENST00000560808 CCINQ13939 588 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 SV2CQ496J9 727 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 RRAGBQ5VZM2 374 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 CEP68Q76N32 757 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 SFR1Q86XK3 245 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 MAB21L3Q8N8X9 362 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 SPPL2BQ8TCT7 592 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 FAM83CQ9BQN1 747 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 FAM213AQ9BRX8 229 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 PI4K2AQ9BTU6 479 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 MRPL44Q9H9J2 332 aaKnown RBP10.31□□□□□ -0.76
NEO1-211ENST00000560808 UPF2Q9HAU5 1272 aaKnown RBP10.31□□□□□ -0.76
NEO1-211ENST00000560808 SEMA4GQ9NTN9 838 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 TBC1D7Q9P0N9 293 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 CCDC39Q9UFE4 941 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 EXOC7Q9UPT5 735 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 PCDHB5Q9Y5E4 795 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 CLIC4Q9Y696 253 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 MYH15Q9Y2K3 1946 aa10.31□□□□□ -0.76
NEO1-211ENST00000560808 EXTL3O43909 919 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 LRP3O75074 770 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 PRPF40AO75400 957 aaKnown RBP10.3□□□□□ -0.76
NEO1-211ENST00000560808 F11P03951 625 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 HMGA1P17096 107 aaKnown RBP10.3□□□□□ -0.76
NEO1-211ENST00000560808 PNPLA4P41247 253 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 NLRP12P59046 1061 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 TSPY1Q01534 308 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 KCNA1Q09470 495 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 GRSF1Q12849 480 aaKnown RBP eCLIP10.3□□□□□ -0.76
NEO1-211ENST00000560808 BFSP1Q12934 665 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 RUNX3Q13761 415 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 CSRP2Q16527 193 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 NFE2Q16621 373 aaPredicted RBP10.3□□□□□ -0.76
NEO1-211ENST00000560808 TXNDC8Q6A555 127 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 CC2D1AQ6P1N0 951 aaPredicted RBP10.3□□□□□ -0.76
NEO1-211ENST00000560808 SV2BQ7L1I2 683 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.3□□□□□ -0.76
NEO1-211ENST00000560808 TMEM150AQ86TG1 271 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 NT5DC4Q86YG4 428 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 EFCAB13Q8IY85 973 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 SYCP3Q8IZU3 236 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 CSGALNACT2Q8N6G5 542 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 CACTINQ8WUQ7 758 aaKnown RBP10.3□□□□□ -0.76
NEO1-211ENST00000560808 USP13Q92995 863 aaPredicted RBP10.3□□□□□ -0.76
NEO1-211ENST00000560808 HVCN1Q96D96 273 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 CNTNAP3BQ96NU0 1288 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 ACCSQ96QU6 501 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 STRA6Q9BX79 667 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 PANK2Q9BZ23 570 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 CNTNAP3Q9BZ76 1288 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 EBF3Q9H4W6 596 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 TDP1Q9NUW8 608 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 TMLHEQ9NVH6 421 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 ZMYM5Q9UJ78 669 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 MAGED2Q9UNF1 606 aaPredicted RBP10.3□□□□□ -0.76
NEO1-211ENST00000560808 AGAP1Q9UPQ3 857 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 CCL26Q9Y258 94 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 PCDHB13Q9Y5F0 798 aa10.3□□□□□ -0.76
NEO1-211ENST00000560808 VPS37CA5D8V6 355 aaPredicted RBP10.29□□□□□ -0.76
NEO1-211ENST00000560808 OTOL1A6NHN0 477 aaPredicted RBP10.29□□□□□ -0.76
NEO1-211ENST00000560808 MYMKA6NI61 221 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms