RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 N4BP2L1Q5TBK1 243 aaPredicted RBP13.04□□□□□ -0.32
MARK3-221ENST00000560603 STPG1Q5TH74 334 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 JADE1Q6IE81 842 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 CC2D1AQ6P1N0 951 aaPredicted RBP13.04□□□□□ -0.32
MARK3-221ENST00000560603 CMTM8Q8IZV2 173 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 CAMKK1Q8N5S9 505 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 TTC9BQ8N6N2 239 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 LPIN3Q9BQK8 851 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 MSTO1Q9BUK6 570 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 HAPLN2Q9GZV7 340 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 ZCWPW1Q9H0M4 648 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 KIF9Q9HAQ2 790 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.04□□□□□ -0.32
MARK3-221ENST00000560603 C2orf42Q9NWW7 574 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 ODF2LQ9ULJ1 636 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 TBX20Q9UMR3 447 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 DERAQ9Y315 318 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 LAMA1P25391 3075 aa13.04□□□□□ -0.32
MARK3-221ENST00000560603 SOBPA7XYQ1 873 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 TRDMT1O14717 391 aaKnown RBP13.03□□□□□ -0.32
MARK3-221ENST00000560603 SLC26A4O43511 780 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 FAM13AO94988 1023 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 PIGRP01833 764 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 DRD1P21728 446 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 PXNP49023 591 aaPredicted RBP13.03□□□□□ -0.32
MARK3-221ENST00000560603 KARSQ15046 597 aaKnown RBP13.03□□□□□ -0.32
MARK3-221ENST00000560603 ELF2Q15723 593 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 IL17AQ16552 155 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 FBXO43Q4G163 708 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 RILPL1Q5EBL4 403 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 C9orf57Q5W0N0 161 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 KBTBD6Q86V97 674 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 DCP1BQ8IZD4 617 aaKnown RBP13.03□□□□□ -0.32
MARK3-221ENST00000560603 OR10T2Q8NGX3 314 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 GIPC2Q8TF65 315 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 MRPS31Q92665 395 aaKnown RBP13.03□□□□□ -0.32
MARK3-221ENST00000560603 PNMA5Q96PV4 448 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 PLIN2Q99541 437 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 FAM83CQ9BQN1 747 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 SLC46A2Q9BY10 475 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 ASB7Q9H672 318 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 IL21Q9HBE4 155 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 VPS45Q9NRW7 570 aa13.03□□□□□ -0.32
MARK3-221ENST00000560603 ZFHX4Q86UP3 3567 aa13.02□□□□□ -0.32
MARK3-221ENST00000560603 A0A0B4J269 797 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 ANO9A1A5B4 782 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 K7ENM7 598 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 PIRO00625 290 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 CYB561D2O14569 222 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 PPEF2O14830 753 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 TM4SF5O14894 197 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 FAM189A1O60320 539 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 RHOBTB1O94844 696 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 HAPLN1P10915 354 aaPredicted RBP13.02□□□□□ -0.33
MARK3-221ENST00000560603 ATF6P18850 670 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 MPLP40238 635 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 TAF6P49848 677 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 ATP2C1P98194 919 aaPredicted RBP13.02□□□□□ -0.33
MARK3-221ENST00000560603 PDGFRLQ15198 375 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 CCDC6Q16204 474 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 PLA2G2CQ5R387 149 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 MCTP1Q6DN14 999 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 FSTL4Q6MZW2 842 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 TMEM130Q8N3G9 435 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 MYCT1Q8N699 235 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 CCDC26Q8TAB7 109 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 ZC3H10Q96K80 434 aaKnown RBP13.02□□□□□ -0.33
MARK3-221ENST00000560603 PYM1Q9BRP8 204 aaKnown RBP13.02□□□□□ -0.33
MARK3-221ENST00000560603 SMG9Q9H0W8 520 aaKnown RBP13.02□□□□□ -0.33
MARK3-221ENST00000560603 PARVGQ9HBI0 331 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 TDP1Q9NUW8 608 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 ABI2Q9NYB9 513 aaPredicted RBP13.02□□□□□ -0.33
MARK3-221ENST00000560603 CPSF3Q9UKF6 684 aaKnown RBP13.02□□□□□ -0.33
MARK3-221ENST00000560603 FRYQ5TBA9 3013 aa13.02□□□□□ -0.33
MARK3-221ENST00000560603 NPHP3-ACAD11A0A0J9YXS1 232 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 VWA3AA6NCI4 1184 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 RNF40O75150 1001 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 KRT18P05783 430 aaKnown RBP13.01□□□□□ -0.33
MARK3-221ENST00000560603 CSH1P0DML2 217 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 CSH2P0DML3 217 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 TSPY1Q01534 308 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 TMEM119Q4V9L6 283 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 ARSHQ5FYA8 562 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 ARL6IP4Q66PJ3 421 aaKnown RBP13.01□□□□□ -0.33
MARK3-221ENST00000560603 RNF43Q68DV7 783 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 SLFN12LQ6IEE8 588 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 CPA6Q8N4T0 437 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 MAB21L3Q8N8X9 362 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 ACDQ96AP0 544 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 CALML4Q96GE6 196 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 AK8Q96MA6 479 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 LSM14BQ9BX40 385 aaKnown RBP13.01□□□□□ -0.33
MARK3-221ENST00000560603 EBF3Q9H4W6 596 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 HPS4Q9NQG7 708 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 UXTQ9UBK9 157 aaPredicted RBP13.01□□□□□ -0.33
MARK3-221ENST00000560603 C2CD2Q9Y426 696 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 PCDHB5Q9Y5E4 795 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 ATG2BQ96BY7 2078 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 IGF2RP11717 2491 aa13.01□□□□□ -0.33
MARK3-221ENST00000560603 ZNF638Q14966 1978 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms