RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 KRT2P35908 639 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 DHPSP49366 369 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 CDR1P51861 262 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 FAM193AP78312 1265 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 IRX6P78412 446 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 AMPD2Q01433 879 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 SPAG1Q07617 926 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 MYBPC2Q14324 1141 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 ECM1Q16610 540 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 SEZ6Q53EL9 994 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 USP39Q53GS9 565 aaKnown RBP9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 TRIM61Q5EBN2 209 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 CYP2U1Q7Z449 544 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 PIP4P1Q86T03 277 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 TMEM150AQ86TG1 271 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 ITIH5Q86UX2 942 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 CHCHD4Q8N4Q1 142 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 MAB21L3Q8N8X9 362 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 PIGKQ92643 395 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 USP13Q92995 863 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 BBC3Q96PG8 261 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 TCHPQ9BT92 498 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 TMEM134Q9H6X4 195 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 TMEM74BQ9NUR3 256 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 HSFX1Q9UBD0 423 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 EVLQ9UI08 416 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 STK36Q9NRP7 1315 aa9.74□□□□□ -0.85
RABGGTA-217ENST00000560521 TMEM131Q92545 1883 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 CCDC169A6NNP5 214 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 CTDNEP1O95476 244 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 FDPSP14324 419 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 CDC25CP30307 473 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 NPTX2P47972 431 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 PEX3P56589 373 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 SIM1P81133 766 aaPredicted RBP9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 PSMD2Q13200 908 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 SEMA3BQ13214 749 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 ZBTB6Q15916 424 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 COL28A1Q2UY09 1125 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 OVOS1Q6IE37 1185 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 MPZL3Q6UWV2 235 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 USP37Q86T82 979 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 C11orf74Q86VG3 221 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 RASSF3Q86WH2 238 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 KIFAP3Q92845 792 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 CD101Q93033 1021 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 MRPL4Q9BYD3 311 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 ECT2Q9H8V3 914 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 PHLPP2Q6ZVD8 1323 aa9.73□□□□□ -0.85
RABGGTA-217ENST00000560521 TP53BP1Q12888 1972 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 UPK3BL1B0FP48 263 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 BTBD18B2RXH4 712 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 UPK3BL2E5RIL1 263 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 H0Y626 953 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 PPEF2O14830 753 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 CDKL5O76039 1030 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 TRIM16O95361 564 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 F11P03951 625 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 HARSP12081 509 aaKnown RBP9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 ENGP17813 658 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 TYMPP19971 482 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 NMT1P30419 496 aaKnown RBP9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 AVPR1AP37288 418 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 MAPK8P45983 427 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 TUFMP49411 452 aaKnown RBP9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 GUCY2FP51841 1108 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 SCAPQ12770 1279 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 LMAN2Q12907 356 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 TXNDC8Q6A555 127 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 SLC23A3Q6PIS1 610 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 DSTYKQ6XUX3 929 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 RAB44Q7Z6P3 723 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 DAW1Q8N136 415 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 FRMD1Q8N878 549 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 TSTD1Q8NFU3 115 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 OR10T2Q8NGX3 314 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 GIPC2Q8TF65 315 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 ACDQ96AP0 544 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 SEPT5Q99719 369 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 NUSAP1Q9BXS6 441 aaKnown RBP9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 BHMT2Q9H2M3 363 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 TDP1Q9NUW8 608 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 ARHGAP28Q9P2N2 729 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 MBD1Q9UIS9 605 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 ZMYM5Q9UJ78 669 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 CYP46A1Q9Y6A2 500 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 MYLKQ15746 1914 aa9.72□□□□□ -0.85
RABGGTA-217ENST00000560521 APC2O95996 2303 aa9.71□□□□□ -0.85
RABGGTA-217ENST00000560521 TTC26A0AVF1 554 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 K7EQS6 105 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 CXCL8P10145 99 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 HNRNPLP14866 589 aaKnown RBP eCLIP9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 HMGA1P17096 107 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 CYP3A5P20815 502 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 NLRP12P59046 1061 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 LILRA4P59901 499 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 BFSP1Q12934 665 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 DMP1Q13316 513 aaPredicted RBP9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 MGAT5BQ3V5L5 792 aa9.71□□□□□ -0.86
RABGGTA-217ENST00000560521 SLC39A12Q504Y0 691 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms