RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TRAPPC10P48553 1259 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 TUFMP49411 452 aaKnown RBP11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 LIMK1P53667 647 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 CREB5Q02930 508 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 MCL1Q07820 350 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 CCINQ13939 588 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 ELF2Q15723 593 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 PSAPL1Q6NUJ1 521 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 PKN3Q6P5Z2 889 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 ZPBP2Q6X784 338 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 DTHD1Q6ZMT9 781 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 C1orf186Q6ZWK4 172 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 LOXL4Q96JB6 756 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 SENP8Q96LD8 212 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 LRRC3BQ96PB8 259 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 HHIPQ96QV1 700 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 EBF3Q9H4W6 596 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 OBP2AQ9NY56 170 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 ABI2Q9NYB9 513 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 KCNG1Q9UIX4 513 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 MAGED2Q9UNF1 606 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 USP24Q9UPU5 2620 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 SCN1AP35498 2009 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 NUP205Q92621 2012 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 MYO16Q9Y6X6 1858 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 THADAQ6YHU6 1953 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 TTC26A0AVF1 554 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 H0YCG3 227 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 PPEF2O14830 753 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 RNF40O75150 1001 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 MAPTP10636 758 aaKnown RBP11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 TYMPP19971 482 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 CYP3A5P20815 502 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 U2AF2P26368 475 aaKnown RBP eCLIP11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 PMLP29590 882 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 AMPD2Q01433 879 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 RUNX3Q13761 415 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 DHX8Q14562 1220 aaKnown RBP11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 TRIM68Q6AZZ1 485 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 JADE1Q6IE81 842 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 TCEAL6Q6IPX3 200 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 KCNK18Q7Z418 384 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 THEM5Q8N1Q8 247 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 MAB21L3Q8N8X9 362 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 IGSF22Q8N9C0 903 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 TMEM161BQ8NDZ6 487 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 SPIRE2Q8WWL2 714 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 TCEAL3Q969E4 200 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 EXOC4Q96A65 974 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 MKNK1Q9BUB5 465 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 MSTO1Q9BUK6 570 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 EDEM2Q9BV94 578 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 ZHX3Q9H4I2 956 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 VPS45Q9NRW7 570 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 LARSQ9P2J5 1176 aaKnown RBP11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 PCDHB6Q9Y5E3 794 aa11.36□□□□□ -0.59
CDC42BPB-207ENST00000560492 NPHP3-ACAD11A0A0J9YXS1 232 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 K7ENM7 598 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 OGTO15294 1046 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 KCNK5O95279 499 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 EGFP01133 1207 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 KRT18P05783 430 aaKnown RBP11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 GUCY2CP25092 1073 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 NMT1P30419 496 aaKnown RBP11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 HOXA6P31267 233 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 AARSP49588 968 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 NOVA1P51513 510 aaKnown RBP11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 LILRA4P59901 499 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 HMGN5P82970 282 aaKnown RBP11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 ST3GAL1Q11201 340 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 FOXC1Q12948 553 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 TMEM132DQ14C87 1099 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 ENOX2Q16206 610 aaKnown RBP11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 KYAT1Q16773 422 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 MCTP1Q6DN14 999 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 FSTL4Q6MZW2 842 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 TTC30AQ86WT1 665 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 CMTM8Q8IZV2 173 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 C4orf32Q8N8J7 132 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 FBXO18Q8NFZ0 1043 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 OR10T2Q8NGX3 314 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 RASSF8Q8NHQ8 419 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 MRPS31Q92665 395 aaKnown RBP11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 PYM1Q9BRP8 204 aaKnown RBP11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 HAPLN2Q9GZV7 340 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 POLR3BQ9NW08 1133 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 LIMCH1Q9UPQ0 1083 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 PCDHGA5Q9Y5G8 931 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 CACNA1GO43497 2377 aa11.35□□□□□ -0.59
CDC42BPB-207ENST00000560492 LAMA1P25391 3075 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 LAD1O00515 517 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 CYB561D2O14569 222 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 PPP1R37O75864 691 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 RHOBTB1O94844 696 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 FAM13AO94988 1023 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 PLA2G4BP0C869 781 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 ARSAP15289 507 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 ATF6P18850 670 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 RAP1GAPP47736 663 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms