RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 AGMOQ6ZNB7 445 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 PHF13Q86YI8 300 aaPredicted RBP11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 HASPINQ8TF76 798 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 RNPC3Q96LT9 517 aaKnown RBP11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 ADAM2Q99965 735 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 KLHL11Q9NVR0 708 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 TSPAN16Q9UKR8 245 aa11.54□□□□□ -0.56
SNRPA1-211ENST00000560433 TCRBV7S2A1N4TA0A589 114 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 ARL5CA6NH57 179 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 A8MXQ7 604 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 KRIT1O00522 736 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 PIRO00625 290 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 GPR182O15218 404 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 CKBP12277 381 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 ACAT1P24752 427 aaKnown RBP11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 CLCNKBP51801 687 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 HADHBP55084 474 aaKnown RBP11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 LONRF2Q1L5Z9 754 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 ATP13A4Q4VNC1 1196 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 LIN9Q5TKA1 542 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 C11orf63Q6NUN7 778 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 TRIM72Q6ZMU5 477 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 EMC1Q8N766 993 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 MSANTD4Q8NCY6 345 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 PBKQ96KB5 322 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 SELENOOQ9BVL4 669 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 NT5C1AQ9BXI3 368 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 ERVK-5Q9HDB9 667 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 RALGAPA2Q2PPJ7 1873 aa11.53□□□□□ -0.56
SNRPA1-211ENST00000560433 I3L4J1 428 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 GRAP2O75791 330 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 MTA2O94776 668 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 ERBB2P04626 1255 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 HSPA6P17066 643 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 PEX5P50542 639 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 PSMC1P62191 440 aaKnown RBP11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 OGDHQ02218 1023 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 MBTPS1Q14703 1052 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 TRIM71Q2Q1W2 868 aaKnown RBP11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 SGO2Q562F6 1265 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 SLAIN1Q8ND83 568 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 C3orf58Q8NDZ4 430 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 KBTBD7Q8WVZ9 684 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 ACSF2Q96CM8 615 aaPredicted RBP11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 PIWIL1Q96J94 861 aaKnown RBP11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 DEFB118Q96PH6 123 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.52□□□□□ -0.562e-8■□□□□ 10.7
SNRPA1-211ENST00000560433 SYNCQ9H7C4 482 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 CYP3A43Q9HB55 503 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 PCDHGC3Q9UN70 934 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 L1RE1Q9UN81 338 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 DERAQ9Y315 318 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 CEP83Q9Y592 693 aa11.52□□□□□ -0.56
SNRPA1-211ENST00000560433 F8VP50 259 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 F8W810 466 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 PGRMC1O00264 195 aaKnown RBP11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 ATP2C2O75185 946 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 PAEPP09466 180 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 CCDC130P13994 396 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 KCNE1P15382 129 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 ADORA2BP29275 332 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 RABGGTBP53611 331 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 ATN1P54259 1190 aaPredicted RBP11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 TAS2R40P59535 323 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 LILRA4P59901 499 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 C1QBPQ07021 282 aaKnown RBP11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 INCA1Q0VD86 236 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 PTK7Q13308 1070 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 XKR4Q5GH76 650 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 PLEKHA7Q6IQ23 1121 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 C8orf74Q6P047 294 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 CC2D1AQ6P1N0 951 aaPredicted RBP11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 DCUN1D2Q6PH85 259 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 TMCO3Q6UWJ1 677 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 ZDHHC14Q8IZN3 488 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 JOSD2Q8TAC2 188 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 CD101Q93033 1021 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 RPGRIP1Q96KN7 1286 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 PPP1R10Q96QC0 940 aaKnown RBP11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 RPS6KC1Q96S38 1066 aa11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 PDCD11Q14690 1871 aaKnown RBP11.52□□□□□ -0.57
SNRPA1-211ENST00000560433 GLI1P08151 1106 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 MYBL1P10243 752 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 ATF7P17544 494 aaPredicted RBP11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 GPD2P43304 727 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 ZNF252P-AS1Q0IIN9 211 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 TCEAL1Q15170 157 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 GOLGA7BQ2TAP0 167 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 DNAJC24Q6P3W2 148 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 ZNF572Q7Z3I7 529 aaPredicted RBP11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 MMGT1Q8N4V1 131 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 UBL4BQ8N7F7 174 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 FEZF2Q8TBJ5 459 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 ACTRT1Q8TDG2 376 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 TSPYL2Q9H2G4 693 aaPredicted RBP11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 AVENQ9NQS1 362 aaPredicted RBP11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 PARVAQ9NVD7 372 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 ARGLU1Q9NWB6 273 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms