RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CRISPLD1Q9H336 500 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 NCDNQ9UBB6 729 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 NDRG2Q9UN36 371 aaKnown RBP14.65□□□□□ -0.06
SMAD3-214ENST00000560402 SMG5Q9UPR3 1016 aaKnown RBP14.65□□□□□ -0.06
SMAD3-214ENST00000560402 EXOC7Q9UPT5 735 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 NCANO14594 1321 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 PPP1R37O75864 691 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 IL18RAPO95256 599 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 CCDC192P0DO97 292 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 GAP43P17677 238 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 WEE1P30291 646 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 CDC25CP30307 473 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 PNPLA4P41247 253 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 VIPR2P41587 438 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 ACOT2P49753 483 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 MTAPQ13126 283 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 ALCAMQ13740 583 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 PUM1Q14671 1186 aaKnown RBP eCLIP14.64□□□□□ -0.07
SMAD3-214ENST00000560402 SV2CQ496J9 727 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 METTL23Q86XA0 190 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 KIAA2013Q8IYS2 634 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 THEM5Q8N1Q8 247 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 TMEM130Q8N3G9 435 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 ATAD1Q8NBU5 361 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 OR10T2Q8NGX3 314 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 SPPL2BQ8TCT7 592 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 ZCWPW1Q9H0M4 648 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 CLSTN2Q9H4D0 955 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 MORC2Q9Y6X9 1032 aaPredicted RBP14.64□□□□□ -0.07
SMAD3-214ENST00000560402 CEP250Q9BV73 2442 aa14.64□□□□□ -0.07
SMAD3-214ENST00000560402 ZNF638Q14966 1978 aaKnown RBP14.64□□□□□ -0.07
SMAD3-214ENST00000560402 ANKRD63C9JTQ0 380 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 DPYSL4O14531 572 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 PPP6R2O75170 966 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 SDHBP21912 280 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 GABRR2P28476 465 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 FAM160A1Q05DH4 1040 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 PTPAQ15257 358 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 ARHGAP29Q52LW3 1261 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 ZC2HC1CQ53FD0 456 aaPredicted RBP14.63□□□□□ -0.07
SMAD3-214ENST00000560402 GAREM2Q75VX8 874 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 ZNF720Q7Z2F6 126 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 DNAJB7Q7Z6W7 309 aaPredicted RBP14.63□□□□□ -0.07
SMAD3-214ENST00000560402 SFR1Q86XK3 245 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 LINC00301Q8NCQ3 95 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 POMGNT1Q8WZA1 660 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 RMDN1Q96DB5 314 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 MKNK1Q9BUB5 465 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 ATXN3LQ9H3M9 355 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 OLFML3Q9NRN5 406 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 DPP3Q9NY33 737 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 SRPRBQ9Y5M8 271 aaKnown RBP14.63□□□□□ -0.07
SMAD3-214ENST00000560402 GPR179Q6PRD1 2367 aa14.63□□□□□ -0.07
SMAD3-214ENST00000560402 CYB561D2O14569 222 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 CAVIN2O95810 425 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 LDHAP00338 332 aaKnown RBP14.62□□□□□ -0.07
SMAD3-214ENST00000560402 TDGF1P13385 188 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 SLC39A14Q15043 492 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 MGAT5BQ3V5L5 792 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 SLC39A12Q504Y0 691 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 GPR158Q5T848 1215 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 RALGPS2Q86X27 583 aaPredicted RBP14.62□□□□□ -0.07
SMAD3-214ENST00000560402 GAS2L3Q86XJ1 694 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 ARID3BQ8IVW6 561 aaPredicted RBP14.62□□□□□ -0.07
SMAD3-214ENST00000560402 BRSK2Q8IWQ3 736 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 EFCAB13Q8IY85 973 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 DCP1BQ8IZD4 617 aaKnown RBP14.62□□□□□ -0.07
SMAD3-214ENST00000560402 TTC9BQ8N6N2 239 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 FSIP1Q8NA03 581 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 FAM200AQ8TCP9 573 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 CCDC34Q96HJ3 373 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 TMEM209Q96SK2 561 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 SEPT5Q99719 369 aaPredicted RBP14.62□□□□□ -0.07
SMAD3-214ENST00000560402 PYM1Q9BRP8 204 aaKnown RBP14.62□□□□□ -0.07
SMAD3-214ENST00000560402 STRA6Q9BX79 667 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 FBXO2Q9UK22 296 aaPredicted RBP14.62□□□□□ -0.07
SMAD3-214ENST00000560402 SLC27A5Q9Y2P5 690 aa14.62□□□□□ -0.07
SMAD3-214ENST00000560402 MYBPHLA2RUH7 354 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 TISP43B9A030 160 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 PAPSS2O95340 614 aaPredicted RBP14.61□□□□□ -0.07
SMAD3-214ENST00000560402 CHRNB1P11230 501 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 ATF6P18850 670 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 CCNE1P24864 410 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 KPNA1P52294 538 aaPredicted RBP14.61□□□□□ -0.07
SMAD3-214ENST00000560402 CCDC173Q0VFZ6 552 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 STXBP5Q5T5C0 1151 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 RRAGBQ5VZM2 374 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 SASS6Q6UVJ0 657 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 SV2BQ7L1I2 683 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 DYMQ7RTS9 669 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 DGLUCYQ7Z3D6 616 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 SPEM1Q8N4L4 309 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 SPATA18Q8TC71 538 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 RSPRY1Q96DX4 576 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 EPSTI1Q96J88 318 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 ACCSQ96QU6 501 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 TASP1Q9H6P5 420 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 MRPL44Q9H9J2 332 aaKnown RBP14.61□□□□□ -0.07
SMAD3-214ENST00000560402 LMAN1LQ9HAT1 526 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms