RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 MCOLN2Q8IZK6 566 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 TOP6BLQ8N6T0 577 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 ANKLE1Q8NAG6 615 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 ZNF564Q8TBZ8 553 aaPredicted RBP11.28□□□□□ -0.6
CRTC3-209ENST00000560320 CPA5Q8WXQ8 436 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 ARHGEF26Q96DR7 871 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 ZFP42Q96MM3 310 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 SELENOOQ9BVL4 669 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 NUP85Q9BW27 656 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 CARD6Q9BX69 1037 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 CRISPLD2Q9H0B8 497 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 CXCL16Q9H2A7 254 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 LHX5Q9H2C1 402 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
CRTC3-209ENST00000560320 RNF19AQ9NV58 838 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 KANSL3Q9P2N6 904 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 HESX1Q9UBX0 185 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 LCMT1Q9UIC8 334 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 LRFN2Q9ULH4 789 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 SNX12Q9UMY4 172 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 INPP5FQ9Y2H2 1132 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 NR2E3Q9Y5X4 410 aa11.28□□□□□ -0.6
CRTC3-209ENST00000560320 SCN5AQ14524 2016 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 A8MXQ7 604 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 PODXLO00592 558 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 PPEF2O14830 753 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 MTA2O94776 668 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 KIF4AO95239 1232 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 FTCDO95954 541 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 GNL1P36915 607 aaPredicted RBP11.27□□□□□ -0.61
CRTC3-209ENST00000560320 ATN1P54259 1190 aaPredicted RBP11.27□□□□□ -0.61
CRTC3-209ENST00000560320 SOX4Q06945 474 aaPredicted RBP11.27□□□□□ -0.61
CRTC3-209ENST00000560320 CNGA2Q16280 664 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 MEI1Q5TIA1 1274 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 C11orf63Q6NUN7 778 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 TRAF7Q6Q0C0 670 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 METTL23Q86XA0 190 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 TMEM130Q8N3G9 435 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 SLC4A11Q8NBS3 891 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 RPGRIP1Q96KN7 1286 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 TNIP3Q96KP6 325 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 TOX2Q96NM4 488 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 FAM193BQ96PV7 902 aaPredicted RBP11.27□□□□□ -0.61
CRTC3-209ENST00000560320 C11orf70Q9BRQ4 267 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 ELOVL4Q9GZR5 314 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 SYNCQ9H7C4 482 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 GOLGA2P5Q9HBQ8 144 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 STRIP2Q9ULQ0 834 aa11.27□□□□□ -0.61
CRTC3-209ENST00000560320 FAM170AA1A519 330 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 CTAGE15A4D2H0 777 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 TMEM110-MUSTN1A8MSY1 372 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 C9IYK1 514 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 M0QYV0 167 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 CYB561D2O14569 222 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 FANCGO15287 622 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 HOXA2O43364 376 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 BUB1BO60566 1050 aaPredicted RBP11.26□□□□□ -0.61
CRTC3-209ENST00000560320 CTAGE8P0CG41 777 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 WARSP23381 471 aaKnown RBP11.26□□□□□ -0.61
CRTC3-209ENST00000560320 SSTR3P32745 418 aaPredicted RBP11.26□□□□□ -0.61
CRTC3-209ENST00000560320 CDH5P33151 784 aaPredicted RBP11.26□□□□□ -0.61
CRTC3-209ENST00000560320 GTF2F1P35269 517 aaKnown RBP eCLIP11.26□□□□□ -0.61
CRTC3-209ENST00000560320 LILRA4P59901 499 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 AMPD2Q01433 879 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 TAP1Q03518 808 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 TUSC3Q13454 348 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 MESDQ14696 234 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 SOWAHAQ2M3V2 549 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 MON1BQ7L1V2 547 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 ANKRD33Q7Z3H0 272 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 CTAGE6Q86UF2 777 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 CTAGE4Q8IX94 777 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 ADGRF2Q8IZF7 708 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 ABI1Q8IZP0 508 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 TMEM86AQ8N2M4 240 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 UBL4BQ8N7F7 174 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 C1orf131Q8NDD1 294 aaKnown RBP11.26□□□□□ -0.61
CRTC3-209ENST00000560320 IPO4Q8TEX9 1081 aaKnown RBP11.26□□□□□ -0.61
CRTC3-209ENST00000560320 WHAMMQ8TF30 809 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 TFAP2BQ92481 460 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 UBXN4Q92575 508 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 GOLGA1Q92805 767 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 PBKQ96KB5 322 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 OSBPL9Q96SU4 736 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 MRPL45Q9BRJ2 306 aaKnown RBP11.26□□□□□ -0.61
CRTC3-209ENST00000560320 HTATIP2Q9BUP3 242 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 HIPK3Q9H422 1215 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 ELAC1Q9H777 363 aaKnown RBP11.26□□□□□ -0.61
CRTC3-209ENST00000560320 OSGEPQ9NPF4 335 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 PARVAQ9NVD7 372 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 WDR35Q9P2L0 1181 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 RNF14Q9UBS8 474 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.26□□□□□ -0.61
CRTC3-209ENST00000560320 PCDHB7Q9Y5E2 793 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 MICAL3Q7RTP6 2002 aa11.26□□□□□ -0.61
CRTC3-209ENST00000560320 CACNA1AO00555 2505 aa11.25□□□□□ -0.61
CRTC3-209ENST00000560320 CASTOR2A6NHX0 329 aa11.25□□□□□ -0.61
CRTC3-209ENST00000560320 MEIS3P2A8K0S8 358 aa11.25□□□□□ -0.61
CRTC3-209ENST00000560320 EFCAB8A8MWE9 144 aa11.25□□□□□ -0.61
CRTC3-209ENST00000560320 MIF4GDA9UHW6 222 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms