RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 KREMEN2Q8NCW0 462 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 OR6B3Q8NGW1 331 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 AUTS2Q8WXX7 1259 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 B3GALT6Q96L58 329 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 NECTIN4Q96NY8 510 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 TSPY26PQ9H489 355 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 IGFLR1Q9H665 355 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 UBE2ZQ9H832 354 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 CLDND1Q9NY35 253 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 EHD2Q9NZN4 543 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 FBXW11Q9UKB1 542 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 BRWD1Q9NSI6 2320 aa12.88□□□□□ -0.35
RABGGTA-215ENST00000560207 A8MXQ7 604 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 PES1O00541 588 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 PRRG1O14668 218 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 PER2O15055 1255 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 TGM5O43548 720 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 XYLBO75191 536 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 TPM3P06753 285 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 MFAP3P55082 362 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 CUL2Q13617 745 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 NCAPHQ15003 741 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 IQCB1Q15051 598 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 CFAP221Q4G0U5 840 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 INTS6LQ5JSJ4 861 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 ANKRD54Q6NXT1 300 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 PALB2Q86YC2 1186 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 CRYBG2Q8N1P7 616 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 ELMOD1Q8N336 334 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 LEMD2Q8NC56 503 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 KBTBD7Q8WVZ9 684 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 ATXN2LQ8WWM7 1075 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 RIPOR3Q96MK2 946 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 NT5C1AQ9BXI3 368 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 GCNT4Q9P109 453 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 ASB3Q9Y575 518 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 PCDHB5Q9Y5E4 795 aa12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 TIMM13Q9Y5L4 95 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-215ENST00000560207 SZT2Q5T011 3432 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 WDR27A2RRH5 827 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 ZMYND10O75800 440 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 IGFBP6P24592 240 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 MTHFRP42898 656 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 MAGEA11P43364 429 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 ASPAP45381 313 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 RPL10AP62906 217 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 KRT31Q15323 416 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 CCDC85BQ15834 202 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 LEXMQ3ZCV2 418 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 MIIPQ5JXC2 388 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 PPM1LQ5SGD2 360 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 FAM171BQ6P995 826 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 VSTM1Q6UX27 236 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 ITIH5Q86UX2 942 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 DHX40Q8IX18 779 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 MYCBPAPQ8TBZ2 947 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 SYT15Q9BQS2 421 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 MAN1C1Q9NR34 630 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 THEGQ9P2T0 379 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 APEX2Q9UBZ4 518 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 CD207Q9UJ71 328 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 CDH23Q9H251 3354 aa12.86□□□□□ -0.35
RABGGTA-215ENST00000560207 CILPO75339 1184 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 CSPG5O95196 566 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 FGF19O95750 216 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 LRG1P02750 347 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 PTPN1P18031 435 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 RPL17P18621 184 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 ALDH1A3P47895 512 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 COPB1P53618 953 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 ARPP19P56211 112 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 ADCY1Q08828 1119 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 STILQ15468 1287 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 ATAT1Q5SQI0 421 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 TRIM65Q6PJ69 517 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 SPATA2LQ8IUW3 424 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 PPM1KQ8N3J5 372 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 B3GALNT2Q8NCR0 500 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 VN1R2Q8NFZ6 395 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 OR10T2Q8NGX3 314 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 LMO3Q8TAP4 145 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 PPM1EQ8WY54 764 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 SEMA4DQ92854 862 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 IQCDQ96DY2 449 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 MSLNLQ96KJ4 702 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 PRKD2Q9BZL6 878 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 ELOVL4Q9GZR5 314 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 INTS2Q9H0H0 1204 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 ADAM7Q9H2U9 754 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 CBX8Q9HC52 389 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 PLCB1Q9NQ66 1216 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 CISHQ9NSE2 258 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 PCDHGC5Q9Y5F6 944 aa12.85□□□□□ -0.35
RABGGTA-215ENST00000560207 MTMR11A4FU01 709 aa12.84□□□□□ -0.35
RABGGTA-215ENST00000560207 LGALS16A8MUM7 142 aa12.84□□□□□ -0.35
RABGGTA-215ENST00000560207 GLP2RO95838 553 aa12.84□□□□□ -0.35
RABGGTA-215ENST00000560207 SERPINC1P01008 464 aa12.84□□□□□ -0.35
RABGGTA-215ENST00000560207 C8AP07357 584 aa12.84□□□□□ -0.35
RABGGTA-215ENST00000560207 PAEPP09466 180 aa12.84□□□□□ -0.35
RABGGTA-215ENST00000560207 EPCAMP16422 314 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms