RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 DDX43Q9NXZ2 648 aaKnown RBP14.19□□□□□ -0.14
SMAD3-213ENST00000560175 SLC27A5Q9Y2P5 690 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 MRPS23Q9Y3D9 190 aaKnown RBP14.19□□□□□ -0.14
SMAD3-213ENST00000560175 PCDHA5Q9Y5H7 936 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 PTPRDP23468 1912 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 WDFY4Q6ZS81 3184 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 GREB1Q4ZG55 1949 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 HAPLN1P10915 354 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-213ENST00000560175 WARSP23381 471 aaKnown RBP14.18□□□□□ -0.14
SMAD3-213ENST00000560175 ALDH1A3P47895 512 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 NFE2Q16621 373 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-213ENST00000560175 EDRF1Q3B7T1 1238 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 SLC39A12Q504Y0 691 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 INTS6LQ5JSJ4 861 aaKnown RBP14.18□□□□□ -0.14
SMAD3-213ENST00000560175 ZNF658Q5TYW1 1059 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-213ENST00000560175 IQCEQ6IPM2 695 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 PARM1Q6UWI2 310 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 DNAJB7Q7Z6W7 309 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-213ENST00000560175 ZC3H3Q8IXZ2 948 aaKnown RBP14.18□□□□□ -0.14
SMAD3-213ENST00000560175 HS6ST3Q8IZP7 471 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 ELMOD1Q8N336 334 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 FBXL6Q8N531 539 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 PSMG2Q969U7 264 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 PBXIP1Q96AQ6 731 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 TCEAL4Q96EI5 215 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 RPP25Q9BUL9 199 aaKnown RBP14.18□□□□□ -0.14
SMAD3-213ENST00000560175 GTPBP4Q9BZE4 634 aaKnown RBP14.18□□□□□ -0.14
SMAD3-213ENST00000560175 KCNH6Q9H252 994 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 ABCB6Q9NP58 842 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 SLC2A4RGQ9NR83 387 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 TMLHEQ9NVH6 421 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 RMND1Q9NWS8 449 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 CHMP5Q9NZZ3 219 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 WNT16Q9UBV4 365 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 KMT2EQ8IZD2 1858 aa14.18□□□□□ -0.14
SMAD3-213ENST00000560175 GADD45BO75293 160 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-213ENST00000560175 AKAP3O75969 853 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 VNN1O95497 513 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 SRFP11831 508 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 ATF6P18850 670 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 PRCPP42785 496 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 EPHB3P54753 998 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 DLG4P78352 724 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 MYL7Q01449 175 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 ZACNQ401N2 412 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 CFAP221Q4G0U5 840 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 CYP4A22Q5TCH4 519 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 TDRD10Q5VZ19 366 aaKnown RBP14.17□□□□□ -0.14
SMAD3-213ENST00000560175 MTSS1LQ765P7 747 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 PDZD4Q76G19 769 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-213ENST00000560175 ADGRF2Q8IZF7 708 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 TRPV4Q9HBA0 871 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 MAPK8IP1Q9UQF2 711 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 FRMD4BQ9Y2L6 1034 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 NME7Q9Y5B8 376 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 NUMBLQ9Y6R0 609 aa14.17□□□□□ -0.14
SMAD3-213ENST00000560175 NARSO43776 548 aaKnown RBP14.16□□□□□ -0.14
SMAD3-213ENST00000560175 ECI2O75521 394 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 SMC2O95347 1197 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 CEBPBP17676 345 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 NR2F2P24468 414 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 LMO2P25791 158 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 RPL13P26373 211 aaKnown RBP14.16□□□□□ -0.14
SMAD3-213ENST00000560175 PCSK1P29120 753 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 WEE1P30291 646 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 MYL6P60660 151 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 TSPY1Q01534 308 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 ADAM9Q13443 819 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 INTS8Q75QN2 995 aaKnown RBP14.16□□□□□ -0.14
SMAD3-213ENST00000560175 GAREM2Q75VX8 874 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 SV2AQ7L0J3 742 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 SYAP1Q96A49 352 aaPredicted RBP14.16□□□□□ -0.14
SMAD3-213ENST00000560175 FUBP3Q96I24 572 aaKnown RBP eCLIP14.16□□□□□ -0.14
SMAD3-213ENST00000560175 MKNK1Q9BUB5 465 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 GPR88Q9GZN0 384 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 IL21Q9HBE4 155 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 ASAH2Q9NR71 780 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 HOOK1Q9UJC3 728 aaKnown RBP14.16□□□□□ -0.14
SMAD3-213ENST00000560175 CDH9Q9ULB4 789 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 R3HCC1Q9Y3T6 440 aaKnown RBP14.16□□□□□ -0.14
SMAD3-213ENST00000560175 PCDHB5Q9Y5E4 795 aa14.16□□□□□ -0.14
SMAD3-213ENST00000560175 OBSL1O75147 1896 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 MYBPHLA2RUH7 354 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 PDGFBP01127 241 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-213ENST00000560175 HMGA1P17096 107 aaKnown RBP14.15□□□□□ -0.14
SMAD3-213ENST00000560175 NPR3P17342 541 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 FCARP24071 287 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 PSMC2P35998 433 aaKnown RBP14.15□□□□□ -0.14
SMAD3-213ENST00000560175 MAGEA11P43364 429 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 WDR72Q3MJ13 1102 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 FOXR2Q6PJQ5 311 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 CLEC17AQ6ZS10 378 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 ITIH5Q86UX2 942 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 SMYD4Q8IYR2 804 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-213ENST00000560175 ADSSL1Q8N142 457 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 SHKBP1Q8TBC3 707 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 SMARCE1Q969G3 411 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 ELSPBP1Q96BH3 223 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 MCRS1Q96EZ8 462 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 ZSWIM3Q96MP5 696 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms