RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CHP1Q99653 195 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 C17orf80Q9BSJ5 609 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 ZBED2Q9BTP6 218 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 IMPG2Q9BZV3 1241 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 MTIF3Q9H2K0 278 aaKnown RBP10.02□□□□□ -0.81
HERC1-206ENST00000559996 DPEP3Q9H4B8 488 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 FAM124BQ9H5Z6 455 aaPredicted RBP10.02□□□□□ -0.81
HERC1-206ENST00000559996 ABHD10Q9NUJ1 306 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 ARHGAP20Q9P2F6 1191 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 BARX2Q9UMQ3 279 aaPredicted RBP10.02□□□□□ -0.81
HERC1-206ENST00000559996 STXBP5LQ9Y2K9 1186 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 PCDHA11Q9Y5I1 949 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 TSC2P49815 1807 aa10.02□□□□□ -0.81
HERC1-206ENST00000559996 SYN3O14994 580 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 HUS1O60921 280 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 ATP2C2O75185 946 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 FGF18O76093 207 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 GFPT2O94808 682 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 CA3P07451 260 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 PLEKP08567 350 aaPredicted RBP10.01□□□□□ -0.81
HERC1-206ENST00000559996 SKILP12757 684 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 CD58P19256 250 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 DNAJB1P25685 340 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 GNL1P36915 607 aaPredicted RBP10.01□□□□□ -0.81
HERC1-206ENST00000559996 STAT1P42224 750 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 TNNC1P63316 161 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 FOXK1P85037 733 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 MLLT1Q03111 559 aaPredicted RBP10.01□□□□□ -0.81
HERC1-206ENST00000559996 CCDC173Q0VFZ6 552 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 ORC1Q13415 861 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 CCDC142Q17RM4 750 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 ZNF394Q53GI3 561 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 RTP2Q5QGT7 225 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 FAM171BQ6P995 826 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 TMEM270Q6UE05 265 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 DSTYKQ6XUX3 929 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 PAQR9Q6ZVX9 377 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 CACNA2D4Q7Z3S7 1137 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 SLC47A2Q86VL8 602 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 PPFIBP1Q86W92 1011 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 UNC93AQ86WB7 457 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 LRRC8AQ8IWT6 810 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 DRC7Q8IY82 874 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 TDHQ8IZJ6 230 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 TMEM86AQ8N2M4 240 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 KLHL23Q8NBE8 558 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 CCDC150Q8NCX0 1101 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 APPL2Q8NEU8 664 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 LNX1Q8TBB1 728 aaPredicted RBP10.01□□□□□ -0.81
HERC1-206ENST00000559996 SPPL3Q8TCT6 385 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 PTCD2Q8WV60 388 aaKnown RBP10.01□□□□□ -0.81
HERC1-206ENST00000559996 PANX2Q96RD6 677 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 KCNF1Q9H3M0 494 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 TMLHEQ9NVH6 421 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 SPG21Q9NZD8 308 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 NOCTQ9UK39 431 aaKnown RBP10.01□□□□□ -0.81
HERC1-206ENST00000559996 PCDHB4Q9Y5E5 795 aa10.01□□□□□ -0.81
HERC1-206ENST00000559996 NLRC5Q86WI3 1866 aa10□□□□□ -0.81
HERC1-206ENST00000559996 PLXNA4Q9HCM2 1894 aa10□□□□□ -0.81
HERC1-206ENST00000559996 PDE4DIPQ5VU43 2346 aa10□□□□□ -0.81
HERC1-206ENST00000559996 ADAM12O43184 909 aa10□□□□□ -0.81
HERC1-206ENST00000559996 VNN2O95498 520 aa10□□□□□ -0.81
HERC1-206ENST00000559996 SOD2P04179 222 aa10□□□□□ -0.81
HERC1-206ENST00000559996 PDGFRBP09619 1106 aa10□□□□□ -0.81
HERC1-206ENST00000559996 P4HA1P13674 534 aa10□□□□□ -0.81
HERC1-206ENST00000559996 LHX1P48742 406 aa10□□□□□ -0.81
HERC1-206ENST00000559996 ERVK-21P61565 698 aa10□□□□□ -0.81
HERC1-206ENST00000559996 CDK17Q00537 523 aa10□□□□□ -0.81
HERC1-206ENST00000559996 DSG1Q02413 1049 aa10□□□□□ -0.81
HERC1-206ENST00000559996 DSG2Q14126 1118 aa10□□□□□ -0.81
HERC1-206ENST00000559996 FAM171A1Q5VUB5 890 aa10□□□□□ -0.81
HERC1-206ENST00000559996 SFMBT2Q5VUG0 894 aa10□□□□□ -0.81
HERC1-206ENST00000559996 PDZRN4Q6ZMN7 1036 aaPredicted RBP10□□□□□ -0.81
HERC1-206ENST00000559996 ZNF571Q7Z3V5 609 aaPredicted RBP10□□□□□ -0.81
HERC1-206ENST00000559996 NOP9Q86U38 636 aaKnown RBP10□□□□□ -0.81
HERC1-206ENST00000559996 ADGRF2Q8IZF7 708 aa10□□□□□ -0.81
HERC1-206ENST00000559996 WDTC1Q8N5D0 677 aa10□□□□□ -0.81
HERC1-206ENST00000559996 C12orf29Q8N999 325 aa10□□□□□ -0.81
HERC1-206ENST00000559996 RBBP8NLQ8NC74 664 aaPredicted RBP10□□□□□ -0.81
HERC1-206ENST00000559996 OR6B3Q8NGW1 331 aa10□□□□□ -0.81
HERC1-206ENST00000559996 OR10T2Q8NGX3 314 aa10□□□□□ -0.81
HERC1-206ENST00000559996 SLC30A5Q8TAD4 765 aa10□□□□□ -0.81
HERC1-206ENST00000559996 SPATA18Q8TC71 538 aa10□□□□□ -0.81
HERC1-206ENST00000559996 EPS8L1Q8TE68 723 aa10□□□□□ -0.81
HERC1-206ENST00000559996 SLC20A1Q8WUM9 679 aa10□□□□□ -0.81
HERC1-206ENST00000559996 ZNF606Q8WXB4 792 aa10□□□□□ -0.81
HERC1-206ENST00000559996 TMEM176AQ96HP8 235 aa10□□□□□ -0.81
HERC1-206ENST00000559996 SPAG5Q96R06 1193 aa10□□□□□ -0.81
HERC1-206ENST00000559996 PCDHB18PQ96TA0 734 aa10□□□□□ -0.81
HERC1-206ENST00000559996 ACBD6Q9BR61 282 aa10□□□□□ -0.81
HERC1-206ENST00000559996 HAUS4Q9H6D7 363 aa10□□□□□ -0.81
HERC1-206ENST00000559996 CRTAC1Q9NQ79 661 aa10□□□□□ -0.81
HERC1-206ENST00000559996 DDX43Q9NXZ2 648 aaKnown RBP10□□□□□ -0.81
HERC1-206ENST00000559996 NENFQ9UMX5 172 aa10□□□□□ -0.81
HERC1-206ENST00000559996 R3HCC1Q9Y3T6 440 aaKnown RBP10□□□□□ -0.81
HERC1-206ENST00000559996 CHD9Q3L8U1 2897 aa10□□□□□ -0.81
HERC1-206ENST00000559996 LAMA3Q16787 3333 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 MYBPHLA2RUH7 354 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 EPOPA6NHQ4 379 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 FSCN2O14926 492 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms