RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 APBB1IPQ7Z5R6 666 aaPredicted RBP8.55□□□□□ -1.04
SMAD3-212ENST00000559937 THNSL1Q8IYQ7 743 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 RIBC1Q8N443 379 aaPredicted RBP8.55□□□□□ -1.04
SMAD3-212ENST00000559937 TTC13Q8NBP0 860 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 PPTC7Q8NI37 304 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 PPM1EQ8WY54 764 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 P3H4Q92791 437 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 NKD2Q969F2 451 aaPredicted RBP8.55□□□□□ -1.04
SMAD3-212ENST00000559937 NLRP4Q96MN2 994 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 XPO6Q96QU8 1125 aaKnown RBP8.55□□□□□ -1.04
SMAD3-212ENST00000559937 MIS12Q9H081 205 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 RASSF4Q9H2L5 321 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 CDC42EP4Q9H3Q1 356 aaKnown RBP8.55□□□□□ -1.04
SMAD3-212ENST00000559937 PPCSQ9HAB8 311 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 AAASQ9NRG9 546 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 MORF4L1Q9UBU8 362 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 KIAA1257Q9ULG3 409 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 R3HDM2Q9Y2K5 976 aaKnown RBP8.55□□□□□ -1.04
SMAD3-212ENST00000559937 PTPN22Q9Y2R2 807 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 FAM169AQ9Y6X4 670 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 LACTBL1A8MY62 500 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 SMAPO00193 183 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 DNALI1O14645 258 aaPredicted RBP8.54□□□□□ -1.04
SMAD3-212ENST00000559937 MEFVO15553 781 aaPredicted RBP8.54□□□□□ -1.04
SMAD3-212ENST00000559937 LIASO43766 372 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 CAPN15O75808 1086 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 CXCL8P10145 99 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 HOXD8P13378 290 aaPredicted RBP8.54□□□□□ -1.04
SMAD3-212ENST00000559937 INSRRP14616 1297 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 CD58P19256 250 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 FGFR4P22455 802 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 EPHX2P34913 555 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 RDXP35241 583 aaKnown RBP8.54□□□□□ -1.04
SMAD3-212ENST00000559937 ADCY8P40145 1251 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 SSR1P43307 286 aaKnown RBP8.54□□□□□ -1.04
SMAD3-212ENST00000559937 GABRB2P47870 512 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 GCLCP48506 637 aaPredicted RBP8.54□□□□□ -1.04
SMAD3-212ENST00000559937 CLCN3P51790 818 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 ITGA8P53708 1063 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 RAD23BP54727 409 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 PTPN11Q06124 597 aaPredicted RBP8.54□□□□□ -1.04
SMAD3-212ENST00000559937 SLC20A2Q08357 652 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 ZNF252P-AS1Q0IIN9 211 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 AUHQ13825 339 aaKnown RBP8.54□□□□□ -1.04
SMAD3-212ENST00000559937 STAT4Q14765 748 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 STILQ15468 1287 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 TAZQ16635 292 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 HADHQ16836 314 aaKnown RBP8.54□□□□□ -1.04
SMAD3-212ENST00000559937 C2CD6Q53TS8 623 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 IZUMO3Q5VZ72 239 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 TTC19Q6DKK2 380 aaPredicted RBP8.54□□□□□ -1.04
SMAD3-212ENST00000559937 HIBCHQ6NVY1 386 aaPredicted RBP8.54□□□□□ -1.04
SMAD3-212ENST00000559937 DLK2Q6UY11 383 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 ZNF410Q86VK4 478 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 WDTC1Q8N5D0 677 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 C1orf127Q8N9H9 656 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 GPRC5AQ8NFJ5 357 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 ATG4AQ8WYN0 398 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 TFAP2BQ92481 460 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 RAPGEF5Q92565 580 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 COPS5Q92905 334 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 FAM212AQ96EL1 285 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 MCRS1Q96EZ8 462 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 CCDC114Q96M63 670 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 TTC25Q96NG3 672 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 MCEEQ96PE7 176 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 CCDC77Q9BR77 488 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 R3HDMLQ9H3Y0 253 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 PDZD7Q9H5P4 517 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 IFT122Q9HBG6 1241 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 PCDH9Q9HC56 1237 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 LGALS13Q9UHV8 139 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 SIX4Q9UIU6 781 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 ITGA11Q9UKX5 1188 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 USTQ9Y2C2 406 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 DERAQ9Y315 318 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 C2CD2Q9Y426 696 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 ACTL7BQ9Y614 415 aa8.54□□□□□ -1.04
SMAD3-212ENST00000559937 TLDC2A0PJX2 215 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 GPR25O00155 361 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 O00370 1275 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 B4GALT5O43286 388 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 CILPO75339 1184 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 HMGCRP04035 888 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 ITGAVP06756 1048 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 STAG3L1P0CL83 205 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 VDRP11473 427 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 CETPP11597 493 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 CD19P15391 556 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 DRD4P21917 467 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 GJA5P36382 358 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 CDKN2BP42772 138 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 SEC24CP53992 1094 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 VCPP55072 806 aaKnown RBP8.53□□□□□ -1.04
SMAD3-212ENST00000559937 RPL7AP62424 266 aaKnown RBP8.53□□□□□ -1.04
SMAD3-212ENST00000559937 HTRA3P83110 453 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 CDC42EP1Q00587 391 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 INCA1Q0VD86 236 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 TMEM132DQ14C87 1099 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 PCBP1Q15365 356 aaKnown RBP eCLIP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms