RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 VEGFBP49765 207 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 ZNF200P98182 395 aaPredicted RBP11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 MDM2Q00987 491 aaPredicted RBP11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 PRPSAP1Q14558 356 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 MAPRE1Q15691 268 aaKnown RBP11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 NT5DC1Q5TFE4 455 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 TMEM199Q8N511 208 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 ATP6V1G3Q96LB4 118 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 SLITRK1Q96PX8 696 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 ENTPD7Q9NQZ7 604 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 CISHQ9NSE2 258 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 ITIH6Q6UXX5 1313 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 RPTORQ8N122 1335 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 FAM237AA0A1B0GTK4 181 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 KLRC4O43908 158 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 AP1G2O75843 785 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 KRT14P02533 472 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 MLH1P40692 756 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 BASP1P80723 227 aaKnown RBP11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 C2CD6Q53TS8 623 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 EFHC2Q5JST6 749 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 FAM171A1Q5VUB5 890 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 JADE1Q6IE81 842 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 SLC35C1Q96A29 364 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 MED15Q96RN5 788 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 SGIP1Q9BQI5 828 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 CDT1Q9H211 546 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 WDR35Q9P2L0 1181 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 MORF4L1Q9UBU8 362 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 CHD4Q14839 1912 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 AMHP03971 560 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 MYBL1P10243 752 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 CDH6P55285 790 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 CDH8P55286 799 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 BIRC2Q13490 618 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 RASIP1Q5U651 963 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 ANKRD20A3Q5VUR7 823 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 CCDC62Q6P9F0 684 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 ARHGEF18Q6ZSZ5 1173 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 CEP120Q8N960 986 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 LPPQ93052 612 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 SPDL1Q96EA4 605 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 HTATIP2Q9BUP3 242 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 RNF186Q9NXI6 227 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 TNFSF13BQ9Y275 285 aa11.21□□□□□ -0.61
CARMIL3-202ENST00000559694 ARIH2O95376 493 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 KRT7P08729 469 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 ACAT1P24752 427 aaKnown RBP11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 MAGOHP61326 146 aaKnown RBP11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 ADCY1Q08828 1119 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 DCAF6Q58WW2 860 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 ZNF473Q8WTR7 871 aaKnown RBP11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 EPN3Q9H201 632 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 GABRQQ9UN88 632 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 SLC8A2Q9UPR5 921 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 MYH2Q9UKX2 1941 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 TJP3O95049 919 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 ARF4P18085 180 aaPredicted RBP11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 CUL1Q13616 776 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 CDKAL1Q5VV42 579 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 OVOS1Q6IE37 1185 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 SPATA24Q86W54 205 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 C1orf131Q8NDD1 294 aaKnown RBP11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 RBM41Q96IZ5 413 aaKnown RBP11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 FMO2Q99518 471 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 TRIM62Q9BVG3 475 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 TRIM4Q9C037 500 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 ANKZF1Q9H8Y5 726 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 SNX12Q9UMY4 172 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 MROH7Q68CQ1 1323 aa11.21□□□□□ -0.62
CARMIL3-202ENST00000559694 SMIM35A0A1B0GVV1 85 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 SGPL1O95470 568 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 SRGAP2BP0DMP2 458 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 HSPA6P17066 643 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 SEC24CP53992 1094 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 ELAVL2Q12926 359 aaKnown RBP11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 RNF219Q5W0B1 726 aaPredicted RBP11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 BZW1Q7L1Q6 419 aaKnown RBP11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 RHOT1Q8IXI2 618 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 GSDMBQ8TAX9 411 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 ZNF296Q8WUU4 475 aaPredicted RBP11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 THOC1Q96FV9 657 aaKnown RBP11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 NDC80O14777 642 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 ECEL1O95672 775 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 LRG1P02750 347 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 MMEP08473 750 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 LSP1P33241 339 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 EPHB1P54762 984 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 SP2Q02086 613 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 YWHAHQ04917 246 aaPredicted RBP11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 PSMD6Q15008 389 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 HYIQ5T013 277 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 MCEEQ96PE7 176 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 ACO2Q99798 780 aaKnown RBP11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 YIPF3Q9GZM5 350 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 IKZF4Q9H2S9 585 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 TJP2Q9UDY2 1190 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 PLAGL2Q9UPG8 496 aa11.2□□□□□ -0.62
CARMIL3-202ENST00000559694 MAFBQ9Y5Q3 323 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms