RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ADAM7Q9H2U9 754 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 CDH22Q9UJ99 828 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 NFE2L3Q9Y4A8 694 aa21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 TCF20Q9UGU0 1960 aaKnown RBP21.72■■□□□ 1.07
TSPAN3-207ENST00000559494 SPDYE4A6NLX3 237 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 CLSTN1O94985 981 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 PAPLNO95428 1278 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 C8AP07357 584 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 PDGFRBP09619 1106 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 WEE2P0C1S8 567 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 BMP1P13497 986 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 ELF1P32519 619 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 RAP1GAPP47736 663 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 NOP14P78316 857 aaKnown RBP21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 ITIH3Q06033 890 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 SLC39A12Q504Y0 691 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 ELMSAN1Q6PJG2 1045 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 SCARA5Q6ZMJ2 495 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 ATAD1Q8NBU5 361 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 SUSD6Q92537 303 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 ZNF707Q96C28 371 aaPredicted RBP21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 PKMYT1Q99640 499 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 CRISPLD1Q9H336 500 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 SNX25Q9H3E2 840 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 CYP4F11Q9HBI6 524 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 TMLHEQ9NVH6 421 aa21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 USP15Q9Y4E8 981 aaPredicted RBP21.71■■□□□ 1.07
TSPAN3-207ENST00000559494 SYCE3A1L190 88 aa21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 MTMR11A4FU01 709 aa21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 ATP2C2O75185 946 aa21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 AFPP02771 609 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 ASPAP45381 313 aa21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 PUS10Q3MIT2 529 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 INTS6LQ5JSJ4 861 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 PPM1LQ5SGD2 360 aa21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 LIN9Q5TKA1 542 aa21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 GPR149Q86SP6 731 aa21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 DCP1BQ8IZD4 617 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 OR6B3Q8NGW1 331 aa21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 SLC7A14Q8TBB6 771 aa21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 IMPG2Q9BZV3 1241 aa21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 ZDHHC7Q9NXF8 308 aa21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 MAFFQ9ULX9 164 aa21.7■■□□□ 1.06
TSPAN3-207ENST00000559494 P4HA2O15460 535 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 N4BP1O75113 896 aaKnown RBP21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 P4HA1P13674 534 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 IL9P15248 144 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 PCSK1P29120 753 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 MTIF2P46199 727 aaKnown RBP21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 TSPY1Q01534 308 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 DUSP4Q13115 394 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 CCDC142Q17RM4 750 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 ANO6Q4KMQ2 910 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 CES5AQ6NT32 575 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 FAM171BQ6P995 826 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 CCDC149Q6ZUS6 474 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 RTL10Q7L3V2 364 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 FAM114A1Q8IWE2 563 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 CCDC150Q8NCX0 1101 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 LMO3Q8TAP4 145 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 BCO2Q9BYV7 579 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 PRKD2Q9BZL6 878 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 GTF3C4Q9UKN8 822 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 CDH9Q9ULB4 789 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 SLC27A5Q9Y2P5 690 aa21.69■■□□□ 1.06
TSPAN3-207ENST00000559494 MYBPHLA2RUH7 354 aa21.68■■□□□ 1.06
TSPAN3-207ENST00000559494 PRRG1O14668 218 aa21.68■■□□□ 1.06
TSPAN3-207ENST00000559494 SMAD2Q15796 467 aaKnown RBP21.68■■□□□ 1.06
TSPAN3-207ENST00000559494 WDR44Q5JSH3 913 aa21.68■■□□□ 1.06
TSPAN3-207ENST00000559494 TTC9BQ8N6N2 239 aa21.68■■□□□ 1.06
TSPAN3-207ENST00000559494 LPIN3Q9BQK8 851 aa21.68■■□□□ 1.06
TSPAN3-207ENST00000559494 SYT15Q9BQS2 421 aa21.68■■□□□ 1.06
TSPAN3-207ENST00000559494 NIF3L1Q9GZT8 377 aa21.68■■□□□ 1.06
TSPAN3-207ENST00000559494 CRTAC1Q9NQ79 661 aa21.68■■□□□ 1.06
TSPAN3-207ENST00000559494 FANCLQ9NW38 375 aa21.68■■□□□ 1.06
TSPAN3-207ENST00000559494 MAGEC2Q9UBF1 373 aaPredicted RBP21.68■■□□□ 1.06
TSPAN3-207ENST00000559494 KCNJ18B7U540 433 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 CCL16O15467 120 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 HNRNPA1P09651 372 aaKnown RBP eCLIP21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 HOXA9P31269 272 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 PSMC1P62191 440 aaKnown RBP21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 SMARCB1Q12824 385 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 KCNJ12Q14500 433 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 NCAPHQ15003 741 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 ZSCAN23Q3MJ62 389 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 ATAT1Q5SQI0 421 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 CDKAL1Q5VV42 579 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 EHBP1Q8NDI1 1231 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 SMG7Q92540 1137 aaKnown RBP21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 FAXDC2Q96IV6 333 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 RHOBTB2Q9BYZ6 727 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 DPEP3Q9H4B8 488 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 CYP3A43Q9HB55 503 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 INSL5Q9Y5Q6 135 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 C2orf16Q68DN1 1984 aa21.67■■□□□ 1.06
TSPAN3-207ENST00000559494 A8MXQ7 604 aa21.66■■□□□ 1.06
TSPAN3-207ENST00000559494 PTPN1P18031 435 aaKnown RBP21.66■■□□□ 1.06
TSPAN3-207ENST00000559494 MTHFRP42898 656 aa21.66■■□□□ 1.06
TSPAN3-207ENST00000559494 MYL5Q02045 173 aa21.66■■□□□ 1.06
TSPAN3-207ENST00000559494 LRMPQ12912 555 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms