RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 GCNAQ96QF7 691 aa8.79□□□□□ -1
SNX1-207ENST00000559401 LPIN3Q9BQK8 851 aa8.79□□□□□ -1
SNX1-207ENST00000559401 PI4K2AQ9BTU6 479 aa8.79□□□□□ -1
SNX1-207ENST00000559401 SNX25Q9H3E2 840 aa8.79□□□□□ -1
SNX1-207ENST00000559401 KCTD10Q9H3F6 313 aa8.79□□□□□ -1
SNX1-207ENST00000559401 AVENQ9NQS1 362 aaPredicted RBP8.79□□□□□ -1
SNX1-207ENST00000559401 RMND1Q9NWS8 449 aa8.79□□□□□ -1
SNX1-207ENST00000559401 GDAP2Q9NXN4 497 aa8.79□□□□□ -1
SNX1-207ENST00000559401 GDE1Q9NZC3 331 aa8.79□□□□□ -1
SNX1-207ENST00000559401 HOOK1Q9UJC3 728 aaKnown RBP8.79□□□□□ -1
SNX1-207ENST00000559401 ASB3Q9Y575 518 aa8.79□□□□□ -1
SNX1-207ENST00000559401 MUC3AQ02505 3323 aa8.78□□□□□ -1
SNX1-207ENST00000559401 A0A1W2PRU2 124 aa8.78□□□□□ -1
SNX1-207ENST00000559401 LRRIQ3A6PVS8 624 aaPredicted RBP8.78□□□□□ -1
SNX1-207ENST00000559401 HCRTO43612 131 aa8.78□□□□□ -1
SNX1-207ENST00000559401 KINO60870 393 aaKnown RBP8.78□□□□□ -1
SNX1-207ENST00000559401 SMC2O95347 1197 aa8.78□□□□□ -1
SNX1-207ENST00000559401 CST3P01034 146 aaPredicted RBP8.78□□□□□ -1
SNX1-207ENST00000559401 NR2F2P24468 414 aa8.78□□□□□ -1
SNX1-207ENST00000559401 GABRR2P28476 465 aa8.78□□□□□ -1
SNX1-207ENST00000559401 ANP32AP39687 249 aaKnown RBP8.78□□□□□ -1
SNX1-207ENST00000559401 CCR2P41597 374 aa8.78□□□□□ -1
SNX1-207ENST00000559401 LHX1P48742 406 aa8.78□□□□□ -1
SNX1-207ENST00000559401 MYL6P60660 151 aa8.78□□□□□ -1
SNX1-207ENST00000559401 PSMC1P62191 440 aaKnown RBP8.78□□□□□ -1
SNX1-207ENST00000559401 KCNB1Q14721 858 aa8.78□□□□□ -1
SNX1-207ENST00000559401 TEAD2Q15562 447 aa8.78□□□□□ -1
SNX1-207ENST00000559401 SOWAHAQ2M3V2 549 aa8.78□□□□□ -1
SNX1-207ENST00000559401 ZNF699Q32M78 642 aa8.78□□□□□ -1
SNX1-207ENST00000559401 WDR72Q3MJ13 1102 aa8.78□□□□□ -1
SNX1-207ENST00000559401 INTS6LQ5JSJ4 861 aaKnown RBP8.78□□□□□ -1
SNX1-207ENST00000559401 PRSS36Q5K4E3 855 aa8.78□□□□□ -1
SNX1-207ENST00000559401 SCARA5Q6ZMJ2 495 aa8.78□□□□□ -1
SNX1-207ENST00000559401 DNAJB7Q7Z6W7 309 aaPredicted RBP8.78□□□□□ -1
SNX1-207ENST00000559401 LRRTM3Q86VH5 581 aa8.78□□□□□ -1
SNX1-207ENST00000559401 OSTM1Q86WC4 334 aa8.78□□□□□ -1
SNX1-207ENST00000559401 SPATA2LQ8IUW3 424 aaPredicted RBP8.78□□□□□ -1
SNX1-207ENST00000559401 SLC9A9Q8IVB4 645 aa8.78□□□□□ -1
SNX1-207ENST00000559401 SMYD4Q8IYR2 804 aaPredicted RBP8.78□□□□□ -1
SNX1-207ENST00000559401 GUF1Q8N442 669 aaKnown RBP8.78□□□□□ -1
SNX1-207ENST00000559401 OR6B3Q8NGW1 331 aa8.78□□□□□ -1
SNX1-207ENST00000559401 CXorf38Q8TB03 319 aa8.78□□□□□ -1
SNX1-207ENST00000559401 SHKBP1Q8TBC3 707 aa8.78□□□□□ -1
SNX1-207ENST00000559401 ERCC4Q92889 916 aaPredicted RBP8.78□□□□□ -1
SNX1-207ENST00000559401 SYAP1Q96A49 352 aaPredicted RBP8.78□□□□□ -1
SNX1-207ENST00000559401 SYT15Q9BQS2 421 aa8.78□□□□□ -1
SNX1-207ENST00000559401 ACBD6Q9BR61 282 aa8.78□□□□□ -1
SNX1-207ENST00000559401 RPP25Q9BUL9 199 aaKnown RBP8.78□□□□□ -1
SNX1-207ENST00000559401 DNAJC25Q9H1X3 360 aa8.78□□□□□ -1
SNX1-207ENST00000559401 ATXN3LQ9H3M9 355 aa8.78□□□□□ -1
SNX1-207ENST00000559401 MMRN2Q9H8L6 949 aa8.78□□□□□ -1
SNX1-207ENST00000559401 ZFP14Q9HCL3 533 aa8.78□□□□□ -1
SNX1-207ENST00000559401 ARHGEF3Q9NR81 526 aa8.78□□□□□ -1
SNX1-207ENST00000559401 TMLHEQ9NVH6 421 aa8.78□□□□□ -1
SNX1-207ENST00000559401 NXF1Q9UBU9 619 aaKnown RBP8.78□□□□□ -1
SNX1-207ENST00000559401 GTF3C4Q9UKN8 822 aa8.78□□□□□ -1
SNX1-207ENST00000559401 MAGED2Q9UNF1 606 aaPredicted RBP8.78□□□□□ -1
SNX1-207ENST00000559401 NUP210Q8TEM1 1887 aaPredicted RBP8.77□□□□□ -1.01
SNX1-207ENST00000559401 ZNF318Q5VUA4 2279 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 FGF19O95750 216 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 PDGFRBP09619 1106 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 HAPLN1P10915 354 aaPredicted RBP8.77□□□□□ -1.01
SNX1-207ENST00000559401 KRT13P13646 458 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 ATF6P18850 670 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 CYP2F1P24903 491 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 RPL13P26373 211 aaKnown RBP8.77□□□□□ -1.01
SNX1-207ENST00000559401 AVPR2P30518 371 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 ATICP31939 592 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 PIK3CAP42336 1068 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 AP3M2P53677 418 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 RPL10AP62906 217 aaKnown RBP8.77□□□□□ -1.01
SNX1-207ENST00000559401 GPC5P78333 572 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 DLG4P78352 724 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 CYP27A1Q02318 531 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 SNW1Q13573 536 aaKnown RBP8.77□□□□□ -1.01
SNX1-207ENST00000559401 GRM2Q14416 872 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 CCDC142Q17RM4 750 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 ARHGAP15Q53QZ3 475 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 ZNF667Q5HYK9 610 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 FAM78AQ5JUQ0 283 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 SDHAF4Q5VUM1 108 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 C4orf50Q6ZRC1 276 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 DPH6Q7L8W6 267 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 TMC8Q8IU68 726 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 SCN4BQ8IWT1 228 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 FAM186BQ8IYM0 893 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 STKLD1Q8NE28 680 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 ZSCAN18Q8TBC5 510 aaPredicted RBP8.77□□□□□ -1.01
SNX1-207ENST00000559401 SPATA18Q8TC71 538 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 PLEKHO2Q8TD55 490 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 PARD3BQ8TEW8 1205 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 KBTBD7Q8WVZ9 684 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 ZNF516Q92618 1163 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 SMARCD2Q92925 531 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 SMARCE1Q969G3 411 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 PSMG2Q969U7 264 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 ZNF334Q9HCZ1 680 aaPredicted RBP8.77□□□□□ -1.01
SNX1-207ENST00000559401 DMAC2Q9NW81 257 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 HSFX1Q9UBD0 423 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 WNT16Q9UBV4 365 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms