RNA–Protein interactions for RNA: ENST00000559257.5

USP3-211, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 2,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-211ENST00000559257 TSPYL4Q9UJ04 414 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 TMEM59LQ9UK28 342 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 GRID1Q9ULK0 1009 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 SPG7Q9UQ90 795 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 CHKBQ9Y259 395 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 DIP2CQ9Y2E4 1556 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 SOS2Q07890 1332 aaPredicted RBP8.86□□□□□ -0.99
USP3-211ENST00000559257 KDM3AQ9Y4C1 1321 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 TYW5A2RUC4 315 aaKnown RBP8.86□□□□□ -0.99
USP3-211ENST00000559257 TRDMT1O14717 391 aaKnown RBP8.86□□□□□ -0.99
USP3-211ENST00000559257 HOXC11O43248 304 aaPredicted RBP8.86□□□□□ -0.99
USP3-211ENST00000559257 EXOC3O60645 756 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 ALAS2P22557 587 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 GSTM2P28161 218 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 AXLP30530 894 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 RAD51Q06609 339 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 ZNF33BQ06732 778 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 SF3A3Q12874 501 aaKnown RBP eCLIP8.86□□□□□ -0.991e-7■■■■□ 19.8
USP3-211ENST00000559257 SELENBP1Q13228 472 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 EFTUD2Q15029 972 aaKnown RBP eCLIP8.86□□□□□ -0.991e-7■■■□□ 14.6
USP3-211ENST00000559257 OXA1LQ15070 435 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 LSM12Q3MHD2 195 aaKnown RBP8.86□□□□□ -0.99
USP3-211ENST00000559257 Q3ZCU0 254 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 FAM205BPQ63HN1 556 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 TATDN1Q6P1N9 297 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 TMC5Q6UXY8 1006 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 BARGINQ6ZT62 677 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 FOXP4Q8IVH2 680 aaPredicted RBP8.86□□□□□ -0.99
USP3-211ENST00000559257 RAVER1Q8IY67 606 aaKnown RBP8.86□□□□□ -0.99
USP3-211ENST00000559257 PI4K2BQ8TCG2 481 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 DTX3LQ8TDB6 740 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 SLC2A14Q8TDB8 520 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 CAPSLQ8WWF8 208 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 TRUB1Q8WWH5 349 aaKnown RBP8.86□□□□□ -0.99
USP3-211ENST00000559257 SEC14L1Q92503 715 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 MAP4K1Q92918 833 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 VPS33AQ96AX1 596 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 TNIP3Q96KP6 325 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 LRGUKQ96M69 825 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 MED15Q96RN5 788 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 KRT12Q99456 494 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 ALG1Q9BT22 464 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 MROQ9BYG7 248 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 TMEM60Q9H2L4 133 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 ADNPQ9H2P0 1102 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 TP63Q9H3D4 680 aaPredicted RBP8.86□□□□□ -0.99
USP3-211ENST00000559257 DPEP3Q9H4B8 488 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 RAD21L1Q9H4I0 556 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 OLFML3Q9NRN5 406 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 PI4KBQ9UBF8 816 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 ZRANB1Q9UGI0 708 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 CNOT7Q9UIV1 285 aaKnown RBP8.86□□□□□ -0.99
USP3-211ENST00000559257 RBM8AQ9Y5S9 174 aaKnown RBP8.86□□□□□ -0.99
USP3-211ENST00000559257 CLIC4Q9Y696 253 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 WASF2Q9Y6W5 498 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 FLT1P17948 1338 aa8.86□□□□□ -0.99
USP3-211ENST00000559257 RCCD1A6NED2 376 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 TSPY2A6NKD2 308 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 GSC2O15499 205 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 ADAMTS4O75173 837 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 FKBP6O75344 327 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 TSPY3P0CV98 308 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 TSPY8P0CW00 308 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 EEF2P13639 858 aaKnown RBP8.85□□□□□ -0.99
USP3-211ENST00000559257 GYS1P13807 737 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 GPR85P60893 370 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 TSPY1Q01534 308 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 OCA2Q04671 838 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 ATP1A4Q13733 1029 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 KRT32Q14532 448 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 DGKDQ16760 1214 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 TRIM16LQ309B1 348 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 HP1BP3Q5SSJ5 553 aaPredicted RBP8.85□□□□□ -0.99
USP3-211ENST00000559257 TTC39BQ5VTQ0 682 aaPredicted RBP8.85□□□□□ -0.99
USP3-211ENST00000559257 CGB2Q6NT52 195 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 CHADLQ6NUI6 762 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 AAGABQ6PD74 315 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 AKAP14Q86UN6 197 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 FAM124AQ86V42 546 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 GATAD2AQ86YP4 633 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 KIAA2013Q8IYS2 634 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 AFAP1L2Q8N4X5 818 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 CCDC89Q8N998 374 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 SYMPKQ92797 1274 aaKnown RBP8.85□□□□□ -0.99
USP3-211ENST00000559257 SH3KBP1Q96B97 665 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 BTBD6Q96KE9 485 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 MAGEB18Q96M61 343 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 MIPEPQ99797 713 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 APOL5Q9BWW9 433 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 Q9H521 79 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 C8orf33Q9H7E9 229 aaPredicted RBP8.85□□□□□ -0.99
USP3-211ENST00000559257 C17orf75Q9HAS0 396 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 TMEM131LA2VDJ0 1609 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 MYO3BQ8WXR4 1341 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 PITPNM2Q9BZ72 1349 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 USP42Q9H9J4 1324 aaKnown RBP8.85□□□□□ -0.99
USP3-211ENST00000559257 SALL1Q9NSC2 1324 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 hCG_2039718K7EN88 272 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 CCRL2O00421 344 aa8.85□□□□□ -0.99
USP3-211ENST00000559257 APOL1O14791 398 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms