RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 RPL36ALQ969Q0 106 aaKnown RBP5.98□□□□□ -1.45
VPS13C-208ENST00000559119 GPR35Q9HC97 309 aa5.98□□□□□ -1.45
VPS13C-208ENST00000559119 IKBKBO14920 756 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 RARBP10826 455 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 CERS1P27544 350 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 PHKA1P46020 1223 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 PIK3CGP48736 1102 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 ALDH9A1P49189 494 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 TUBA4AP68366 448 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 KRT85P78386 507 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 MAPK7Q13164 816 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 PCBP2Q15366 365 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS13C-208ENST00000559119 EFCAB2Q5VUJ9 269 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 SLC29A4Q7RTT9 530 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 FANCBQ8NB91 859 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 C3orf20Q8ND61 904 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 KLHDC4Q8TBB5 520 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 SERPINB13Q9UIV8 391 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 POLHQ9Y253 713 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 ATP8A1Q9Y2Q0 1164 aa5.97□□□□□ -1.45
VPS13C-208ENST00000559119 TP73O15350 636 aa5.96□□□□□ -1.46
VPS13C-208ENST00000559119 KIF20AO95235 890 aa5.96□□□□□ -1.46
VPS13C-208ENST00000559119 ARIH2O95376 493 aa5.96□□□□□ -1.46
VPS13C-208ENST00000559119 BMP15O95972 392 aa5.96□□□□□ -1.46
VPS13C-208ENST00000559119 FTH1P19P0C7X4 201 aa5.96□□□□□ -1.46
VPS13C-208ENST00000559119 EPHB2P29323 1055 aa5.96□□□□□ -1.46
VPS13C-208ENST00000559119 ADKP55263 362 aaKnown RBP5.96□□□□□ -1.46
VPS13C-208ENST00000559119 DSC2Q02487 901 aa5.96□□□□□ -1.46
VPS13C-208ENST00000559119 ITKQ08881 620 aa5.96□□□□□ -1.46
VPS13C-208ENST00000559119 ZNF618Q5T7W0 954 aa5.96□□□□□ -1.46
VPS13C-208ENST00000559119 BHMT2Q9H2M3 363 aa5.96□□□□□ -1.46
VPS13C-208ENST00000559119 MRPS18AQ9NVS2 196 aaKnown RBP5.96□□□□□ -1.46
VPS13C-208ENST00000559119 AGAP1Q9UPQ3 857 aa5.96□□□□□ -1.46
VPS13C-208ENST00000559119 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 QSOX1O00391 747 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 LATS1O95835 1130 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 GNAI2P04899 355 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 MPGP29372 298 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 PRDX5P30044 214 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 GCLCP48506 637 aaPredicted RBP5.95□□□□□ -1.46
VPS13C-208ENST00000559119 GUCY2FP51841 1108 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 KIF22Q14807 665 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 ETFDHQ16134 617 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 PROSER3Q2NL68 480 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 LCE1AQ5T7P2 110 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 C11orf87Q6NUJ2 197 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 ANKRD16Q6P6B7 361 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 ZNF804AQ7Z570 1209 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 YTHDF3Q7Z739 585 aaKnown RBP5.95□□□□□ -1.46
VPS13C-208ENST00000559119 NEK8Q86SG6 692 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 TBC1D5Q92609 795 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 MTMR8Q96EF0 704 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 FCRL4Q96PJ5 515 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 NELL2Q99435 816 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 C1orf43Q9BWL3 253 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 TINAGL1Q9GZM7 467 aaPredicted RBP5.95□□□□□ -1.46
VPS13C-208ENST00000559119 SPC25Q9HBM1 224 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 PCDHA3Q9Y5H8 950 aa5.95□□□□□ -1.46
VPS13C-208ENST00000559119 LRRC14BA6NHZ5 514 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 PRSS29PA6NIE9 313 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 SMIM22K7EJ46 135 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 FZD9O00144 591 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 PPM1DO15297 605 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 CYP2D6P10635 497 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 JUPP14923 745 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 PCSK6P29122 969 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 MTMR1Q13613 665 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 KLF9Q13886 244 aaPredicted RBP5.94□□□□□ -1.46
VPS13C-208ENST00000559119 AARS2Q5JTZ9 985 aaKnown RBP5.94□□□□□ -1.46
VPS13C-208ENST00000559119 THEMIS2Q5TEJ8 643 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 VPS53Q5VIR6 699 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 MORN5Q5VZ52 161 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 EGFLAMQ63HQ2 1017 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 SLC9A4Q6AI14 798 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 ZNF66Q6ZN08 573 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 USP37Q86T82 979 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 FAM109AQ8N4B1 249 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 DDX17Q92841 729 aaKnown RBP5.94□□□□□ -1.46
VPS13C-208ENST00000559119 TNPO1Q92973 898 aaKnown RBP5.94□□□□□ -1.46
VPS13C-208ENST00000559119 CCDC8Q9H0W5 538 aaPredicted RBP5.94□□□□□ -1.46
VPS13C-208ENST00000559119 WDCPQ9H6R7 721 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 BTBD3Q9Y2F9 522 aa5.94□□□□□ -1.46
VPS13C-208ENST00000559119 M0QYG6 137 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 PPP6CO00743 305 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 IGKV2-30P06310 120 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 PDHA1P08559 390 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 FXR1P51114 621 aaKnown RBP eCLIP5.93□□□□□ -1.46
VPS13C-208ENST00000559119 KRTAP10-9P60411 292 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 PRAMEF17Q5VTA0 474 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 FAM90A1Q86YD7 464 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 MIER2Q8N344 545 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 DENND1AQ8TEH3 1009 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 ZBTB9Q96C00 473 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 REPS1Q96D71 796 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 SERHLQ9NQF3 203 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 FEZ2Q9UHY8 353 aaPredicted RBP5.93□□□□□ -1.46
VPS13C-208ENST00000559119 ZDHHC8Q9ULC8 765 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 TBC1D30Q9Y2I9 924 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 ZNF521Q96K83 1311 aa5.93□□□□□ -1.46
VPS13C-208ENST00000559119 GABRDO14764 452 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms