RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 BEST2Q8NFU1 509 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 URGCPQ8TCY9 931 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 AGAP1Q9UPQ3 857 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 CHD9Q3L8U1 2897 aa16.92■□□□□ 0.3
CDC42BPB-204ENST00000559043 SPTLC1O15269 473 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 GFPT2O94808 682 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 ITGB1P05556 798 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 CXCR5P32302 372 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 BMP8BP34820 402 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 RNASELQ05823 741 aaKnown RBP16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 NCOA4Q13772 614 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 SPOPLQ6IQ16 392 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 GJB7Q6PEY0 223 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 YME1L1Q96TA2 773 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 ZBED2Q9BTP6 218 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 STK33Q9BYT3 514 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 ZMYND15Q9H091 742 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 VIPAS39Q9H9C1 493 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 SLC38A7Q9NVC3 462 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 RAB20Q9NX57 234 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 MRPL42Q9Y6G3 142 aaKnown RBP16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 GRID2IPA4D2P6 1211 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 PHACTR2O75167 634 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 KRT19P08727 400 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 STAT1P42224 750 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 PAFAH1B1P43034 410 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 CCDC181Q5TID7 509 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 CCDC70Q6NSX1 233 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 ALKBH5Q6P6C2 394 aaKnown RBP16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 CCNI2Q6ZMN8 369 aaPredicted RBP16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 SPRED2Q7Z698 418 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 FBXL13Q8NEE6 735 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 RAD9AQ99638 391 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 APOBEC3GQ9HC16 384 aaKnown RBP16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 CHD7Q9P2D1 2997 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 ITGA11Q9UKX5 1188 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 INTUQ9ULD6 942 aa16.91■□□□□ 0.3
CDC42BPB-204ENST00000559043 NT5C1B-RDH14C9J2C7 533 aa16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 F8VZ95 297 aa16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 H3BQF6 201 aa16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 SOX5P35711 763 aa16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 SLC11A1P49279 550 aa16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 GPS2Q13227 327 aa16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 BTG3Q14201 252 aaPredicted RBP16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 VPS36Q86VN1 386 aa16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 TMEM173Q86WV6 379 aaPredicted RBP16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 CMTR2Q8IYT2 770 aaKnown RBP16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 OLIG1Q8TAK6 271 aa16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 TATDN2Q93075 761 aa16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 PSMB7Q99436 277 aa16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 MTIF3Q9H2K0 278 aaKnown RBP16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 INSL6Q9Y581 213 aa16.9■□□□□ 0.3
CDC42BPB-204ENST00000559043 P4HA2O15460 535 aa16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 TLL1O43897 1013 aa16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 ZC3H11AO75152 810 aaKnown RBP eCLIP16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 GALTP07902 379 aa16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 RBP5P82980 135 aa16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 CFAP221Q4G0U5 840 aa16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 FMNL3Q8IVF7 1028 aa16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 LRRC43Q8N309 656 aa16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 SLC30A5Q8TAD4 765 aa16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 SP7Q8TDD2 431 aaPredicted RBP16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 BCL7CQ8WUZ0 217 aaPredicted RBP16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 GPR88Q9GZN0 384 aa16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 INTS2Q9H0H0 1204 aaKnown RBP16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 DNAJC12Q9UKB3 198 aa16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 PRDM4Q9UKN5 801 aa16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 NUB1Q9Y5A7 615 aa16.89■□□□□ 0.3
CDC42BPB-204ENST00000559043 A0A0A6YYK5 440 aaPredicted RBP16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 DDX3XO00571 662 aaKnown RBP eCLIP16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 PODXLO00592 558 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 CES2O00748 559 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 NRP1O14786 923 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 POLR3GO15318 223 aaPredicted RBP16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 ASS1P00966 412 aaKnown RBP16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 PBX2P40425 430 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 PIK3CAP42336 1068 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 BCAR1P56945 870 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 LILRA4P59901 499 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 IFI16Q16666 785 aaKnown RBP16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 PHLDB3Q6NSJ2 640 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 HASPINQ8TF76 798 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 SYT11Q9BT88 431 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 LRRC1Q9BTT6 524 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 MRPL9Q9BYD2 267 aaKnown RBP16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 APEX2Q9UBZ4 518 aa16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 PRG3Q9Y2Y8 225 aaPredicted RBP16.89■□□□□ 0.29
CDC42BPB-204ENST00000559043 XPOTO43592 962 aaKnown RBP16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 N4BP1O75113 896 aaKnown RBP16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 KIF4AO95239 1232 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 FTCDO95954 541 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 RFX1P22670 979 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 RPL9P32969 192 aaKnown RBP16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 OR1G1P47890 313 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 TRPC3Q13507 836 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 DRAP1Q14919 205 aaPredicted RBP16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 ARHGEF19Q8IW93 802 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 LRRC57Q8N9N7 239 aa16.88■□□□□ 0.29
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