RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 MTMR11A4FU01 709 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 BIN1O00499 593 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 CCL16O15467 120 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 N4BP1O75113 896 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 PTMSP20962 102 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 FSHRP23945 695 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 MXI1P50539 228 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 CCDC40Q4G0X9 1142 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 PABPC1LQ4VXU2 614 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 TCERG1LQ5VWI1 586 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 ANKRD40Q6AI12 368 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 ISM2Q6H9L7 571 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 KLHL10Q6JEL2 608 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 RNF19BQ6ZMZ0 732 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 SV2AQ7L0J3 742 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 FRMD5Q7Z6J6 570 aa16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 FUBP3Q96I24 572 aaKnown RBP eCLIP16.91■□□□□ 0.3
RABGGTA-205ENST00000558534 GABRDO14764 452 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 MICAL2O94851 1124 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 CST3P01034 146 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 CCDC192P0DO97 292 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 GBP2P32456 591 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 MYL6P60660 151 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 RPL10AP62906 217 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 TAF12Q16514 161 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 SOWAHAQ2M3V2 549 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 WDR44Q5JSH3 913 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 INTS6LQ5JSJ4 861 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 PDZD4Q76G19 769 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 LIMS2Q7Z4I7 341 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 SPATA2LQ8IUW3 424 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 ZNF516Q92618 1163 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 TNIP3Q96KP6 325 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 CEP295NLQ96MC4 621 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 NECAB3Q96P71 396 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 ASAH2Q9NR71 780 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 IGSF9Q9P2J2 1179 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 RWDD2AQ9UIY3 292 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 ZMYM5Q9UJ78 669 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 CTNND2Q9UQB3 1225 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 YIPF1Q9Y548 306 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 C5orf42Q9H799 3197 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 ATP8B3O60423 1300 aa16.9■□□□□ 0.3
RABGGTA-205ENST00000558534 PPP1R3GB7ZBB8 358 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 DCXO43602 365 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 WEE2P0C1S8 567 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 GNL1P36915 607 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 DLG4P78352 724 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 TWF1Q12792 350 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 DUSP4Q13115 394 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 DCAF17Q5H9S7 520 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 GRASPQ7Z6J2 395 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 RNF135Q8IUD6 432 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 TMEM130Q8N3G9 435 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 FBXL13Q8NEE6 735 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 OR6B3Q8NGW1 331 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 OR10T2Q8NGX3 314 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 PLEKHO2Q8TD55 490 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 PGLYRP2Q96PD5 576 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 SYT15Q9BQS2 421 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 C1QTNF1Q9BXJ1 281 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 GPR88Q9GZN0 384 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 GZF1Q9H116 711 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 EHD2Q9NZN4 543 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 EPS15L1Q9UBC2 864 aa16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 NXF1Q9UBU9 619 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 MRPS23Q9Y3D9 190 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-205ENST00000558534 C2CD4DB7Z1M9 353 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 SEC24AO95486 1093 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 ASS1P00966 412 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 HLA-DRAP01903 254 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 OR4Q2P0C623 313 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 GCLMP48507 274 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 TPD52L1Q16890 204 aaPredicted RBP16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 MGAT5BQ3V5L5 792 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 CFAP221Q4G0U5 840 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 MTSS1LQ765P7 747 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 GET4Q7L5D6 327 aaPredicted RBP16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 FAM200AQ8TCP9 573 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 GCNAQ96QF7 691 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 SEPT5Q99719 369 aaPredicted RBP16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 XYLT2Q9H1B5 865 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 CYP3A43Q9HB55 503 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 ABI2Q9NYB9 513 aaPredicted RBP16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 GDE1Q9NZC3 331 aa16.88■□□□□ 0.29
RABGGTA-205ENST00000558534 TRIM49BA6NDI0 452 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 A8MXQ7 604 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 P4HA2O15460 535 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 TRIM49P0CI25 452 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 TRIM49CP0CI26 452 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 YWHAEP62258 255 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 MTMR3Q13615 1198 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 TTI2Q6NXR4 508 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 VSTM1Q6UX27 236 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 UNC93AQ86WB7 457 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 FAM114A1Q8IWE2 563 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 UBALD2Q8IYN6 164 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 PSMG2Q969U7 264 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 RTP3Q9BQQ7 232 aa16.87■□□□□ 0.29
RABGGTA-205ENST00000558534 CORO1BQ9BR76 489 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms