RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 TELO2Q9Y4R8 837 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 FRMPD2Q68DX3 1309 aaPredicted RBP11.78□□□□□ -0.52
PCAT29-201ENST00000558411 RBBP6Q7Z6E9 1792 aaKnown RBP11.78□□□□□ -0.52
PCAT29-201ENST00000558411 DOT1LQ8TEK3 1739 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 C15orf38-AP3S2A0A0A6YYH1 394 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 MEIS1O00470 390 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 CASQ2O14958 399 aaPredicted RBP11.78□□□□□ -0.52
PCAT29-201ENST00000558411 PMM2O15305 246 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 DENRO43583 198 aaKnown RBP11.78□□□□□ -0.52
PCAT29-201ENST00000558411 PSTPIP1O43586 416 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 CLPTM1O96005 669 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 TFAP2AP05549 437 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 STIP1P31948 543 aaKnown RBP11.78□□□□□ -0.52
PCAT29-201ENST00000558411 RASA3Q14644 834 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 EFHC1Q5JVL4 640 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 SYDE2Q5VT97 1194 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 DRICH1Q6PGQ1 229 aaPredicted RBP11.78□□□□□ -0.52
PCAT29-201ENST00000558411 GSTA5Q7RTV2 222 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 ARPINQ7Z6K5 226 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 CROCCP3Q8IVE0 287 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 SLC35B4Q969S0 331 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 ANO3Q9BYT9 981 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 BHMT2Q9H2M3 363 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 JMJD4Q9H9V9 463 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 AVENQ9NQS1 362 aaPredicted RBP11.78□□□□□ -0.52
PCAT29-201ENST00000558411 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 ZNF148Q9UQR1 794 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 SUGT1Q9Y2Z0 365 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 RABGAP1Q9Y3P9 1069 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 MYH11P35749 1972 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 ZNFX1Q9P2E3 1918 aaKnown RBP11.78□□□□□ -0.52
PCAT29-201ENST00000558411 PPP1R11O60927 126 aaPredicted RBP11.77□□□□□ -0.52
PCAT29-201ENST00000558411 ENO1P06733 434 aaKnown RBP11.77□□□□□ -0.52
PCAT29-201ENST00000558411 RALAP11233 206 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 EIF4BP23588 611 aaKnown RBP11.77□□□□□ -0.52
PCAT29-201ENST00000558411 ETV4P43268 484 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 CPA2P48052 419 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 CYP2J2P51589 502 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 AQP4P55087 323 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 PLCB3Q01970 1234 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 PLOD1Q02809 727 aaPredicted RBP11.77□□□□□ -0.52
PCAT29-201ENST00000558411 DLG1Q12959 904 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 PDIA2Q13087 525 aaKnown RBP11.77□□□□□ -0.52
PCAT29-201ENST00000558411 LLGL1Q15334 1064 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 SLC44A4Q53GD3 710 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 RINT1Q6NUQ1 792 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 TREML1Q86YW5 311 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 FNDC8Q8TC99 324 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 TGFBRAP1Q8WUH2 860 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 TMEM174Q8WUU8 243 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 ABTB1Q969K4 478 aaPredicted RBP11.77□□□□□ -0.52
PCAT29-201ENST00000558411 TEKT1Q969V4 418 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 DNAJC1Q96KC8 554 aaKnown RBP11.77□□□□□ -0.52
PCAT29-201ENST00000558411 WWP1Q9H0M0 922 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 FAIMQ9NVQ4 179 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 ARMCX1Q9P291 453 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 SLC17A7Q9P2U7 560 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 ANAPC7Q9UJX3 599 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 STRIP2Q9ULQ0 834 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 BARX2Q9UMQ3 279 aaPredicted RBP11.77□□□□□ -0.52
PCAT29-201ENST00000558411 SORCS3Q9UPU3 1222 aa11.77□□□□□ -0.52
PCAT29-201ENST00000558411 CCNT2O60583 730 aaKnown RBP11.77□□□□□ -0.53
PCAT29-201ENST00000558411 FDX1P10109 184 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 NMT1P30419 496 aaKnown RBP11.77□□□□□ -0.53
PCAT29-201ENST00000558411 PSMD7P51665 324 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 TMEM62Q0P6H9 643 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 HIC1Q14526 733 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 COG2Q14746 738 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 FASTKD3Q14CZ7 662 aaKnown RBP11.77□□□□□ -0.53
PCAT29-201ENST00000558411 NSMFQ6X4W1 530 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 MYCT1Q8N699 235 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 ICA1LQ8NDH6 482 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 DDI1Q8WTU0 396 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 FAM20AQ96MK3 541 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 C7orf26Q96N11 449 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 Q9H521 79 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 PARVGQ9HBI0 331 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 SOX13Q9UN79 622 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 PPME1Q9Y570 386 aa11.77□□□□□ -0.53
PCAT29-201ENST00000558411 EMSYQ7Z589 1322 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 A0A088AWK7 358 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 IPO5O00410 1097 aaKnown RBP11.76□□□□□ -0.53
PCAT29-201ENST00000558411 WDR46O15213 610 aaKnown RBP11.76□□□□□ -0.53
PCAT29-201ENST00000558411 OATP04181 439 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 LDHBP07195 334 aaKnown RBP11.76□□□□□ -0.53
PCAT29-201ENST00000558411 TSHRP16473 764 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 ACADVLP49748 655 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 RAB15P59190 212 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 AP3B2Q13367 1082 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 SPIDRQ14159 915 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 USP41Q3LFD5 358 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 EAPPQ56P03 285 aaPredicted RBP11.76□□□□□ -0.53
PCAT29-201ENST00000558411 NCCRP1Q6ZVX7 275 aaPredicted RBP11.76□□□□□ -0.53
PCAT29-201ENST00000558411 ZNF720Q7Z2F6 126 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 ALYREFQ86V81 257 aaKnown RBP11.76□□□□□ -0.53
PCAT29-201ENST00000558411 KATNAL2Q8IYT4 538 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 ADGRF4Q8IZF3 695 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 ATP11CQ8NB49 1132 aa11.76□□□□□ -0.53
PCAT29-201ENST00000558411 FBXO27Q8NI29 283 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms