RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 MTMR9Q96QG7 549 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 FNBP1Q96RU3 617 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 ZSWIM1Q9BR11 485 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 POLR3CQ9BUI4 534 aaPredicted RBP11.47□□□□□ -0.57
USP3-206ENST00000558157 WNT8AQ9H1J5 351 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 EHMT1Q9H9B1 1298 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 PPCSQ9HAB8 311 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 ETNK2Q9NVF9 386 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 CYP3A7-CYP3A51PA0A087WV96 503 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 A0A0J9YVX5 310 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 HAUS5O94927 633 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 ACTN1P12814 892 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 XRCC5P13010 732 aaKnown RBP11.47□□□□□ -0.57
USP3-206ENST00000558157 CYP3A7P24462 503 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 RPS6P62753 249 aaKnown RBP11.47□□□□□ -0.57
USP3-206ENST00000558157 AP2B1P63010 937 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 MPP3Q13368 585 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 ZNF211Q13398 564 aaPredicted RBP11.47□□□□□ -0.57
USP3-206ENST00000558157 EPHA7Q15375 998 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 ADRM1Q16186 407 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 TRMT5Q32P41 509 aaKnown RBP11.47□□□□□ -0.57
USP3-206ENST00000558157 TKFCQ3LXA3 575 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 C6orf163Q5TEZ5 329 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 MOXD1Q6UVY6 613 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 IZUMO2Q6UXV1 221 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 RNF207Q6ZRF8 634 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 NET1Q7Z628 596 aaPredicted RBP11.47□□□□□ -0.57
USP3-206ENST00000558157 SNF8Q96H20 258 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 FOXP3Q9BZS1 431 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 TMEM165Q9HC07 324 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 GPAMQ9HCL2 828 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 RHBDL2Q9NX52 303 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 ZNF148Q9UQR1 794 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 ZMYM2Q9UBW7 1377 aa11.47□□□□□ -0.57
USP3-206ENST00000558157 FAM86B1E9PN63 330 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 AP1G1O43747 822 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 OATP04181 439 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 CYP3A4P08684 503 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 FAM86B2P0C5J1 330 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 SERPINB3P29508 390 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 TXKP42681 527 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 B3GNT6Q6ZMB0 384 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 RASAL3Q86YV0 1011 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 GLIS3Q8NEA6 775 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 LNX1Q8TBB1 728 aaPredicted RBP11.46□□□□□ -0.57
USP3-206ENST00000558157 DIS3LQ8TF46 1054 aaKnown RBP11.46□□□□□ -0.57
USP3-206ENST00000558157 MAML1Q92585 1016 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 GJA10Q969M2 543 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 UIMC1Q96RL1 719 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 PHACTR1Q9C0D0 580 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 SPATC1LQ9H0A9 340 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 METTL5Q9NRN9 209 aaKnown RBP11.46□□□□□ -0.57
USP3-206ENST00000558157 ANKFY1Q9P2R3 1169 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 TUBGCP4Q9UGJ1 667 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 PCDHA2Q9Y5H9 948 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 ALG6Q9Y672 507 aa11.46□□□□□ -0.57
USP3-206ENST00000558157 CIITAP33076 1130 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 CCNFP41002 786 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 BAATQ14032 418 aaPredicted RBP11.46□□□□□ -0.58
USP3-206ENST00000558157 PRR16Q569H4 304 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 HSP90AA5PQ58FG0 334 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 TMEM63BQ5T3F8 832 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 MTDHQ86UE4 582 aaKnown RBP11.46□□□□□ -0.58
USP3-206ENST00000558157 TRABD2AQ86V40 505 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 SLC13A5Q86YT5 568 aaPredicted RBP11.46□□□□□ -0.58
USP3-206ENST00000558157 PASD1Q8IV76 773 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 CYP4X1Q8N118 509 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 SAMD3Q8N6K7 520 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 PDCD7Q8N8D1 485 aaKnown RBP11.46□□□□□ -0.58
USP3-206ENST00000558157 BBOF1Q8ND07 529 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 IL31RAQ8NI17 732 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 HAS1Q92839 578 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 LENG9Q96B70 501 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 MPP4Q96JB8 637 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 TAAR1Q96RJ0 339 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 DDX50Q9BQ39 737 aaKnown RBP11.46□□□□□ -0.58
USP3-206ENST00000558157 SYT11Q9BT88 431 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 TRAIPQ9BWF2 469 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 TXNRD2Q9NNW7 524 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 SSU72Q9NP77 194 aaKnown RBP11.46□□□□□ -0.58
USP3-206ENST00000558157 SIX2Q9NPC8 291 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 NDE1Q9NXR1 346 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 CHMP2BQ9UQN3 213 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 TRAF3IP3Q9Y228 551 aa11.46□□□□□ -0.58
USP3-206ENST00000558157 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.46□□□□□ -0.58
USP3-206ENST00000558157 ANKRD63C9JTQ0 380 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 PDHXO00330 501 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 TP73O15350 636 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 SLC16A3O15427 465 aaKnown RBP11.45□□□□□ -0.58
USP3-206ENST00000558157 SORBS3O60504 671 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 HNRNPCP07910 306 aaKnown RBP eCLIP11.45□□□□□ -0.589e-7■■■□□ 16.3
USP3-206ENST00000558157 CYP2C8P10632 490 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 ANPEPP15144 967 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 EIF4BP23588 611 aaKnown RBP11.45□□□□□ -0.58
USP3-206ENST00000558157 SOX5P35711 763 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 ZNF76P36508 570 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 CD97P48960 835 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 NEK3P51956 506 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 ADARP55265 1226 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms