RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TWNKQ96RR1 684 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 RAD9AQ99638 391 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 ACP6Q9NPH0 428 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 MARCH5Q9NX47 278 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 DDX43Q9NXZ2 648 aaKnown RBP17.95■□□□□ 0.46
SNX1-203ENST00000558040 MRPL42Q9Y6G3 142 aaKnown RBP17.95■□□□□ 0.46
SNX1-203ENST00000558040 PTPRSQ13332 1948 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 A0A087X0T9 212 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 DDX3XO00571 662 aaKnown RBP eCLIP17.94■□□□□ 0.46
SNX1-203ENST00000558040 ZSCAN12O43309 604 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 TLL1O43897 1013 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 FAM228BP0C875 321 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 BRD2P25440 801 aaKnown RBP17.94■□□□□ 0.46
SNX1-203ENST00000558040 MSNP26038 577 aaKnown RBP17.94■□□□□ 0.46
SNX1-203ENST00000558040 FMO1Q01740 532 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 YWHAHQ04917 246 aaPredicted RBP17.94■□□□□ 0.46
SNX1-203ENST00000558040 ORC1Q13415 861 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 RASIP1Q5U651 963 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 OVOS1Q6IE37 1185 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 PPP1R2P3Q6NXS1 205 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 KCNT2Q6UVM3 1135 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 ACOT1Q86TX2 421 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 OSTM1Q86WC4 334 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 CRYBG2Q8N1P7 616 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 DESI2Q9BSY9 194 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 CDH9Q9ULB4 789 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 CEP83Q9Y592 693 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 TIMM13Q9Y5L4 95 aaPredicted RBP17.94■□□□□ 0.46
SNX1-203ENST00000558040 ADGRG1Q9Y653 693 aa17.94■□□□□ 0.46
SNX1-203ENST00000558040 NT5C1B-RDH14C9J2C7 533 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 PDGFRBP09619 1106 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 CHRNB2P17787 502 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 LMO2P25791 158 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 PPM1AP35813 382 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 CCDC122Q5T0U0 273 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 ALKBH5Q6P6C2 394 aaKnown RBP17.93■□□□□ 0.46
SNX1-203ENST00000558040 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.93■□□□□ 0.46
SNX1-203ENST00000558040 COLGALT1Q8NBJ5 622 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 B3GALNT2Q8NCR0 500 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 ACRBPQ8NEB7 543 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 SLC30A5Q8TAD4 765 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 LNX1Q8TBB1 728 aaPredicted RBP17.93■□□□□ 0.46
SNX1-203ENST00000558040 KIAA1524Q8TCG1 905 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 IGSF21Q96ID5 467 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 RNPC3Q96LT9 517 aaKnown RBP17.93■□□□□ 0.46
SNX1-203ENST00000558040 NAGPAQ9UK23 515 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 PCDHGC3Q9UN70 934 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 PCDHB12Q9Y5F1 795 aa17.93■□□□□ 0.46
SNX1-203ENST00000558040 LSM8O95777 96 aaKnown RBP17.92■□□□□ 0.46
SNX1-203ENST00000558040 CALCAP01258 141 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 GZMAP12544 262 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 PBX3P40426 434 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 CNGA2Q16280 664 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 FAM171A1Q5VUB5 890 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 KIAA1328Q86T90 577 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 SLC39A11Q8N1S5 342 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 PIAS4Q8N2W9 510 aaPredicted RBP17.92■□□□□ 0.46
SNX1-203ENST00000558040 SP7Q8TDD2 431 aaPredicted RBP17.92■□□□□ 0.46
SNX1-203ENST00000558040 TFAP2BQ92481 460 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 TMEM169Q96HH4 297 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 SYT15Q9BQS2 421 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 ACBD6Q9BR61 282 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 DPEP3Q9H4B8 488 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 SPG21Q9NZD8 308 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 STK39Q9UEW8 545 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 PPP2R2CQ9Y2T4 447 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 NME7Q9Y5B8 376 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 PCDHA13Q9Y5I0 950 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 TSC2P49815 1807 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 ATP8B3O60423 1300 aa17.92■□□□□ 0.46
SNX1-203ENST00000558040 GOLGA6L9A6NEM1 432 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 O00370 1275 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 OAZ2O95190 189 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 PTPN1P18031 435 aaKnown RBP17.91■□□□□ 0.46
SNX1-203ENST00000558040 FGFR3P22607 806 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 TKTP29401 623 aaKnown RBP17.91■□□□□ 0.46
SNX1-203ENST00000558040 MAGEA1P43355 309 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 TSPY1Q01534 308 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 CYP27A1Q02318 531 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 CLEC16AQ2KHT3 1053 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 ARHGAP17Q68EM7 881 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 CEP57Q86XR8 500 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 TMEM35BQ8NCS4 154 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 OLIG1Q8TAK6 271 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 OXCT2Q9BYC2 517 aaPredicted RBP17.91■□□□□ 0.46
SNX1-203ENST00000558040 GPR62Q9BZJ7 368 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 ZNF518BQ9C0D4 1074 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 LHX5Q9H2C1 402 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 KCND1Q9NSA2 647 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.91■□□□□ 0.46
SNX1-203ENST00000558040 HESX1Q9UBX0 185 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.91■□□□□ 0.46
SNX1-203ENST00000558040 RWDD3Q9Y3V2 267 aa17.91■□□□□ 0.46
SNX1-203ENST00000558040 H7C4K7 107 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 ZNF263O14978 683 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 HCRTO43612 131 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 RTN2O75298 545 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 CYP1A1P04798 512 aaPredicted RBP17.9■□□□□ 0.46
SNX1-203ENST00000558040 ACAT1P24752 427 aaKnown RBP17.9■□□□□ 0.46
SNX1-203ENST00000558040 VAV2P52735 878 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms