RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SOAT2O75908 522 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 HAPLN1P10915 354 aaPredicted RBP14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 PDIA4P13667 645 aaKnown RBP14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 SDHBP21912 280 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 CXCL12P48061 93 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 RBP5P82980 135 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 STK38Q15208 465 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 FAM173BQ6P4H8 233 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 TMEM86AQ8N2M4 240 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 CSGALNACT2Q8N6G5 542 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 TTC9BQ8N6N2 239 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 CELF5Q8N6W0 485 aaKnown RBP14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 LRRC52Q8N7C0 313 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 NELL1Q92832 810 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 ZNF396Q96N95 335 aaPredicted RBP14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 PRMT8Q9NR22 394 aaPredicted RBP14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 ABI2Q9NYB9 513 aaPredicted RBP14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 ITGA11Q9UKX5 1188 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 RAB23Q9ULC3 237 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 AGAP1Q9UPQ3 857 aa14.66□□□□□ -0.06
SNRPA1-204ENST00000558020 F5P12259 2224 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 ARNTLO00327 626 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 NRG2O14511 850 aaPredicted RBP14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 ITGB3P05106 788 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 DDX6P26196 483 aaKnown RBP eCLIP14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 AVPR1AP37288 418 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 RPL10AP62906 217 aaKnown RBP14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 MYL7Q01449 175 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 KCNA1Q09470 495 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 MYO1EQ12965 1108 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 SURF1Q15526 300 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 DGKKQ5KSL6 1271 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 BRSK2Q8IWQ3 736 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 EFCAB13Q8IY85 973 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 ZNF687Q8N1G0 1237 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 SPATA18Q8TC71 538 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 BPIFB1Q8TDL5 484 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 NOC3LQ8WTT2 800 aaKnown RBP14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 SAAL1Q96ER3 474 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 USP28Q96RU2 1077 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 LPIN3Q9BQK8 851 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 ACBD6Q9BR61 282 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 CUEDC2Q9H467 287 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 KIAA1586Q9HCI6 787 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 MTMR6Q9Y217 621 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 FANCMQ8IYD8 2048 aa14.65□□□□□ -0.06
SNRPA1-204ENST00000558020 FRMD3A2A2Y4 597 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 SHISA7A6NL88 538 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 SLC38A8A6NNN8 435 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 LILRB5O75023 590 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 PRPF40AO75400 957 aaKnown RBP14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 KRT19P08727 400 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 TMEM191BP0C7N4 346 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 CSH1P0DML2 217 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 CSH2P0DML3 217 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 CHRNB1P11230 501 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 POLR2BP30876 1174 aaKnown RBP14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 LHX1P48742 406 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 AMPD2Q01433 879 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 PUM1Q14671 1186 aaKnown RBP eCLIP14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 STXBP5Q5T5C0 1151 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 TSSK4Q6SA08 328 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 LRRTM3Q86VH5 581 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 GPIHBP1Q8IV16 184 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 SPEM1Q8N4L4 309 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 PDILTQ8N807 584 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 GIPC2Q8TF65 315 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 EPC1Q9H2F5 836 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 TNMDQ9H2S6 317 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 IKZF4Q9H2S9 585 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 ABCB6Q9NP58 842 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 GDAP2Q9NXN4 497 aa14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 UXTQ9UBK9 157 aaPredicted RBP14.64□□□□□ -0.07
SNRPA1-204ENST00000558020 SCN1AP35498 2009 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 MYBPHLA2RUH7 354 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 ZNF233A6NK53 670 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 SPECC1L-ADORA2AF8WAN1 911 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 K7ELQ4 463 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 SPTLC2O15270 562 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 TNNC2P02585 160 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 ATF6P18850 670 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 PCSK1P29120 753 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 NASPP49321 788 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 BFSP1Q12934 665 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 DUOXA2Q1HG44 320 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 ITPRIPL2Q3MIP1 535 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 CC2D1AQ6P1N0 951 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 DPH6Q7L8W6 267 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 CMTM8Q8IZV2 173 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 GPD1LQ8N335 351 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 SYNPOQ8N3V7 929 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 PDCL2Q8N4E4 241 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 DCLK2Q8N568 766 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 C1orf127Q8N9H9 656 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 IQUBQ8NA54 791 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 MRPS31Q92665 395 aaKnown RBP14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 EXOC4Q96A65 974 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 RSPRY1Q96DX4 576 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 ANKRD36BP1Q96IX9 119 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 MKNK1Q9BUB5 465 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms