RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 SMTNL1A8MU46 457 aa27.32■■□□□ 1.96
SMAD6-202ENST00000557916 PDGFRBP09619 1106 aa27.32■■□□□ 1.96
SMAD6-202ENST00000557916 ELF1P32519 619 aa27.32■■□□□ 1.96
SMAD6-202ENST00000557916 TFF2Q03403 129 aa27.32■■□□□ 1.96
SMAD6-202ENST00000557916 SLC39A12Q504Y0 691 aa27.32■■□□□ 1.96
SMAD6-202ENST00000557916 LRRTM3Q86VH5 581 aa27.32■■□□□ 1.96
SMAD6-202ENST00000557916 C12orf76Q8N812 135 aaPredicted RBP27.32■■□□□ 1.96
SMAD6-202ENST00000557916 TATDN2Q93075 761 aa27.32■■□□□ 1.96
SMAD6-202ENST00000557916 PGLYRP2Q96PD5 576 aa27.32■■□□□ 1.96
SMAD6-202ENST00000557916 BCO2Q9BYV7 579 aa27.32■■□□□ 1.96
SMAD6-202ENST00000557916 CD207Q9UJ71 328 aa27.32■■□□□ 1.96
SMAD6-202ENST00000557916 SPTBN5Q9NRC6 3674 aaKnown RBP27.31■■□□□ 1.96
SMAD6-202ENST00000557916 WEE2P0C1S8 567 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 ADCY1Q08828 1119 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 LRMPQ12912 555 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 VWA3BQ502W6 1294 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 INTS6LQ5JSJ4 861 aaKnown RBP27.31■■□□□ 1.96
SMAD6-202ENST00000557916 DHX40Q8IX18 779 aaKnown RBP27.31■■□□□ 1.96
SMAD6-202ENST00000557916 EHBP1Q8NDI1 1231 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 FAXDC2Q96IV6 333 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 APOL5Q9BWW9 433 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 NDST4Q9H3R1 872 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 SFXN1Q9H9B4 322 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 CYP3A43Q9HB55 503 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 CYP4F11Q9HBI6 524 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 CDH9Q9ULB4 789 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 MAFFQ9ULX9 164 aa27.31■■□□□ 1.96
SMAD6-202ENST00000557916 A8MXQ7 604 aa27.3■■□□□ 1.96
SMAD6-202ENST00000557916 C8AP07357 584 aa27.3■■□□□ 1.96
SMAD6-202ENST00000557916 LEXMQ3ZCV2 418 aa27.3■■□□□ 1.96
SMAD6-202ENST00000557916 RARS2Q5T160 578 aaKnown RBP27.3■■□□□ 1.96
SMAD6-202ENST00000557916 CCDC149Q6ZUS6 474 aa27.3■■□□□ 1.96
SMAD6-202ENST00000557916 TCEAL8Q8IYN2 117 aa27.3■■□□□ 1.96
SMAD6-202ENST00000557916 LMO3Q8TAP4 145 aa27.3■■□□□ 1.96
SMAD6-202ENST00000557916 SLC7A14Q8TBB6 771 aa27.3■■□□□ 1.96
SMAD6-202ENST00000557916 SYT15Q9BQS2 421 aa27.3■■□□□ 1.96
SMAD6-202ENST00000557916 NME7Q9Y5B8 376 aa27.3■■□□□ 1.96
SMAD6-202ENST00000557916 XIRP2A4UGR9 3374 aa27.3■■□□□ 1.96
SMAD6-202ENST00000557916 PRRG1O14668 218 aa27.29■■□□□ 1.96
SMAD6-202ENST00000557916 RFPL2O75678 378 aa27.29■■□□□ 1.96
SMAD6-202ENST00000557916 ZMYND10O75800 440 aa27.29■■□□□ 1.96
SMAD6-202ENST00000557916 SEC24AO95486 1093 aa27.29■■□□□ 1.96
SMAD6-202ENST00000557916 UVSSAQ2YD98 709 aa27.29■■□□□ 1.96
SMAD6-202ENST00000557916 MIIPQ5JXC2 388 aa27.29■■□□□ 1.96
SMAD6-202ENST00000557916 S1PR5Q9H228 398 aa27.29■■□□□ 1.96
SMAD6-202ENST00000557916 TAB2Q9NYJ8 693 aa27.29■■□□□ 1.96
SMAD6-202ENST00000557916 GTF3C4Q9UKN8 822 aa27.29■■□□□ 1.96
SMAD6-202ENST00000557916 MTMR11A4FU01 709 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 BECN2A8MW95 431 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 PES1O00541 588 aaKnown RBP27.28■■□□□ 1.96
SMAD6-202ENST00000557916 ATP2C2O75185 946 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 VNN2O95498 520 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 CAVIN2O95810 425 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 CDK11BP21127 795 aaKnown RBP27.28■■□□□ 1.96
SMAD6-202ENST00000557916 CDR1P51861 262 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 PSMC1P62191 440 aaKnown RBP27.28■■□□□ 1.96
SMAD6-202ENST00000557916 SMARCB1Q12824 385 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 IQCB1Q15051 598 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 KRT31Q15323 416 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 AAK1Q2M2I8 961 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 PPM1LQ5SGD2 360 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 TMC5Q6UXY8 1006 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 ATAD1Q8NBU5 361 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 SMRP1Q8NCR6 262 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 ANKRD20A12PQ8NF67 263 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 NT5C1BQ96P26 610 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 CRACR2AQ9BSW2 395 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 INTS2Q9H0H0 1204 aaKnown RBP27.28■■□□□ 1.96
SMAD6-202ENST00000557916 HSD3B7Q9H2F3 369 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 TMLHEQ9NVH6 421 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 ZDHHC7Q9NXF8 308 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 GCNT4Q9P109 453 aa27.28■■□□□ 1.96
SMAD6-202ENST00000557916 CCDC195A0A1B0GUA6 201 aa27.27■■□□□ 1.96
SMAD6-202ENST00000557916 MYBPHLA2RUH7 354 aa27.27■■□□□ 1.96
SMAD6-202ENST00000557916 ZNF18P17022 549 aa27.27■■□□□ 1.96
SMAD6-202ENST00000557916 ITIH3Q06033 890 aa27.27■■□□□ 1.96
SMAD6-202ENST00000557916 NFE2Q16621 373 aaPredicted RBP27.27■■□□□ 1.96
SMAD6-202ENST00000557916 GBP6Q6ZN66 633 aa27.27■■□□□ 1.96
SMAD6-202ENST00000557916 RTL10Q7L3V2 364 aa27.27■■□□□ 1.96
SMAD6-202ENST00000557916 CMASQ8NFW8 434 aaPredicted RBP27.27■■□□□ 1.96
SMAD6-202ENST00000557916 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.27■■□□□ 1.96
SMAD6-202ENST00000557916 ATXN2LQ8WWM7 1075 aaKnown RBP27.27■■□□□ 1.96
SMAD6-202ENST00000557916 PKMYT1Q99640 499 aa27.27■■□□□ 1.96
SMAD6-202ENST00000557916 ADAM7Q9H2U9 754 aa27.27■■□□□ 1.96
SMAD6-202ENST00000557916 CBX8Q9HC52 389 aa27.27■■□□□ 1.96
SMAD6-202ENST00000557916 CRTAC1Q9NQ79 661 aa27.27■■□□□ 1.96
SMAD6-202ENST00000557916 MTCL1Q9Y4B5 1905 aaKnown RBP27.27■■□□□ 1.96
SMAD6-202ENST00000557916 GTPBP10A4D1E9 387 aaKnown RBP27.26■■□□□ 1.95
SMAD6-202ENST00000557916 SLC34A2O95436 690 aa27.26■■□□□ 1.95
SMAD6-202ENST00000557916 TPM2P07951 284 aa27.26■■□□□ 1.95
SMAD6-202ENST00000557916 CD58P19256 250 aa27.26■■□□□ 1.95
SMAD6-202ENST00000557916 DUSP4Q13115 394 aa27.26■■□□□ 1.95
SMAD6-202ENST00000557916 CUL2Q13617 745 aa27.26■■□□□ 1.95
SMAD6-202ENST00000557916 FAM171BQ6P995 826 aa27.26■■□□□ 1.95
SMAD6-202ENST00000557916 UNC93AQ86WB7 457 aa27.26■■□□□ 1.95
SMAD6-202ENST00000557916 C2orf15Q8WU43 125 aaKnown RBP27.26■■□□□ 1.95
SMAD6-202ENST00000557916 ARID3AQ99856 593 aa27.26■■□□□ 1.95
SMAD6-202ENST00000557916 VPS16Q9H269 839 aa27.26■■□□□ 1.95
SMAD6-202ENST00000557916 DPEP3Q9H4B8 488 aa27.26■■□□□ 1.95
SMAD6-202ENST00000557916 SLC27A5Q9Y2P5 690 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms