RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 DAAM1Q9Y4D1 1078 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 ASB3Q9Y575 518 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 SPDYE4A6NLX3 237 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 KCNJ18B7U540 433 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 EPCAMP16422 314 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 KCNA5P22460 613 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 GTF2F1P35269 517 aaKnown RBP eCLIP14.63□□□□□ -0.07
SHMT2-234ENST00000557703 MTHFRP42898 656 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 TPM4P67936 248 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 GCNT1Q02742 428 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 INCA1Q0VD86 236 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 KCNJ12Q14500 433 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 ZSCAN23Q3MJ62 389 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 CFAP221Q4G0U5 840 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 ANO6Q4KMQ2 910 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 INTS6LQ5JSJ4 861 aaKnown RBP14.63□□□□□ -0.07
SHMT2-234ENST00000557703 ATAT1Q5SQI0 421 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 FAM171BQ6P995 826 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 RSPO2Q6UXX9 243 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-234ENST00000557703 EHBP1Q8NDI1 1231 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 KBTBD7Q8WVZ9 684 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 PRKD2Q9BZL6 878 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 S1PR5Q9H228 398 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 NDST4Q9H3R1 872 aa14.63□□□□□ -0.07
SHMT2-234ENST00000557703 BARX2Q9UMQ3 279 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-234ENST00000557703 SYCE3A1L190 88 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 BECN2A8MW95 431 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 A8MXQ7 604 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 TBX10O75333 385 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 CSPG5O95196 566 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 ASPAP45381 313 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 VWA3BQ502W6 1294 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 PPM1LQ5SGD2 360 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 SYCE2Q6PIF2 218 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 VSTM1Q6UX27 236 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 GBP6Q6ZN66 633 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 EP400NLQ6ZTU2 488 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 C11orf57Q6ZUT1 292 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-234ENST00000557703 GPR149Q86SP6 731 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 CRYBG2Q8N1P7 616 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 LEMD2Q8NC56 503 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 OR6B3Q8NGW1 331 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 NT5C1BQ96P26 610 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 RTP3Q9BQQ7 232 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 MMRN2Q9H8L6 949 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 PRKAG3Q9UGI9 489 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 KIAA1257Q9ULG3 409 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 PCDHB5Q9Y5E4 795 aa14.62□□□□□ -0.07
SHMT2-234ENST00000557703 EYSQ5T1H1 3165 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 PRRG1O14668 218 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 LINC01565O15544 149 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 ADAM12O43184 909 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 CLSTN1O94985 981 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 C8AP07357 584 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 CDK11BP21127 795 aaKnown RBP14.61□□□□□ -0.07
SHMT2-234ENST00000557703 RFX1P22670 979 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 MAGEA11P43364 429 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 ADCY1Q08828 1119 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 SMAD2Q15796 467 aaKnown RBP14.61□□□□□ -0.07
SHMT2-234ENST00000557703 EXOC3L4Q17RC7 722 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 SLC39A12Q504Y0 691 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 LLGL2Q6P1M3 1020 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 CREBRFQ8IUR6 639 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 ELMOD1Q8N336 334 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 TMEM130Q8N3G9 435 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 OR10T2Q8NGX3 314 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 LMO3Q8TAP4 145 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 MYCBPAPQ8TBZ2 947 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 SUSD6Q92537 303 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 SEMA4DQ92854 862 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 FAM84AQ96KN4 292 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 ASB2Q96Q27 587 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 SYT15Q9BQS2 421 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 NT5C1AQ9BXI3 368 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 CYP4F11Q9HBI6 524 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 AVENQ9NQS1 362 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-234ENST00000557703 SAMSN1Q9NSI8 373 aaKnown RBP14.61□□□□□ -0.07
SHMT2-234ENST00000557703 FANCLQ9NW38 375 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 EHD2Q9NZN4 543 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 REV3LO60673 3130 aa14.61□□□□□ -0.07
SHMT2-234ENST00000557703 CCDC195A0A1B0GUA6 201 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 MTMR11A4FU01 709 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 GRXCR2A6NFK2 248 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 MICAL2O94851 1124 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 FGF19O95750 216 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 LRG1P02750 347 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 ZNF18P17022 549 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 PTPN1P18031 435 aaKnown RBP14.6□□□□□ -0.07
SHMT2-234ENST00000557703 ALDH1A3P47895 512 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 ARPP19P56211 112 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 RPL10AP62906 217 aaKnown RBP14.6□□□□□ -0.07
SHMT2-234ENST00000557703 DLX2Q07687 328 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-234ENST00000557703 CUL2Q13617 745 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 NCAPHQ15003 741 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 RNF19BQ6ZMZ0 732 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 ITIH5Q86UX2 942 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 GLYCTKQ8IVS8 523 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 B3GALNT2Q8NCR0 500 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 PKMYT1Q99640 499 aa14.6□□□□□ -0.07
SHMT2-234ENST00000557703 APOBEC3GQ9HC16 384 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms