RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SGK1O00141 431 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 AHCYL1O43865 530 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 NPTXRO95502 500 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 IFNB1P01574 187 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 ITGAVP06756 1048 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 FESP07332 822 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 NEFHP12036 1026 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 GPX6P59796 221 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 KRT76Q01546 638 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 PLCB3Q01970 1234 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 CUL2Q13617 745 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 OASLQ15646 514 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 KLHL38Q2WGJ6 581 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 PLEKHG4Q58EX7 1191 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 APBB1IPQ7Z5R6 666 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 ATP11CQ8NB49 1132 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 SPDYE1Q8NFV5 336 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 PYROXD1Q8WU10 500 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 NKD2Q969F2 451 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 VPS11Q9H270 941 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 RABGEF1Q9UJ41 708 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 ZNF646O15015 1829 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 KDM4FA0A1W2PPD8 638 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 TCP10L2B9ZVM9 353 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 EXTL3O43909 919 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 SSTR3P32745 418 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 CLDN10P78369 228 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 PSMD6Q15008 389 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 ZRSR2Q15696 482 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 KHDC1Q4VXA5 237 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 SPOPLQ6IQ16 392 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 IRGCQ6NXR0 463 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 TMEM154Q6P9G4 183 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 RFWD3Q6PCD5 774 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 ADGRD1Q6QNK2 874 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 ANO5Q75V66 913 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 RFWD2Q8NHY2 731 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 TCP10LQ8TDR4 215 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 NSL1Q96IY1 281 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 ZNF333Q96JL9 665 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 TSC22D3Q99576 134 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 PHACTR1Q9C0D0 580 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 VCXQ9H320 206 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 MANSC1Q9H8J5 431 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 NMRK1Q9NWW6 199 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 KANSL3Q9P2N6 904 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 HEY2Q9UBP5 337 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 IVNS1ABPQ9Y6Y0 642 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 CLUHO75153 1309 aa12.44□□□□□ -0.42
VIPAS39-211ENST00000557658 hCG_1818297A0A087WSY0 165 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 A0A0G2JND7 137 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 EME2A4GXA9 379 aaPredicted RBP12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 CFAP69A5D8W1 941 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 TMEM191CA6NGB0 347 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 GOLGA8SH3BPF8 625 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 GOLGA8MH3BSY2 632 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 CCNE2O96020 404 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 C4BPAP04003 597 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 TMEM191BP0C7N4 346 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 TCF4P15884 667 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 GLRA2P23416 452 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 PTPN7P35236 360 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 PTGER2P43116 358 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 ARFIP2P53365 341 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 ARL4CP56559 192 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 SESN3P58005 492 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 RPL7AP62424 266 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 SARNPP82979 210 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 OVGP1Q12889 678 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 TFDP1Q14186 410 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 TFDP3Q5H9I0 405 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 TDRD10Q5VZ19 366 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 CLEC4DQ8WXI8 215 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 HAUS1Q96CS2 278 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 CEP170P1Q96L14 293 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 PAFAH2Q99487 392 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 USP21Q9UK80 565 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 GYG2O15488 501 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 GSC2O15499 205 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 SMIM24O75264 130 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 BANF1O75531 89 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 MYCLP12524 364 aaPredicted RBP12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 EIF2AK2P19525 551 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 CAP2P40123 477 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 SOX10P56693 466 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 WDR72Q3MJ13 1102 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 SLC27A3Q5K4L6 730 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 PPIL6Q8IXY8 311 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 BANPQ8N9N5 519 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 MCUR1Q96AQ8 359 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 PTCD3Q96EY7 689 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 SYT15Q9BQS2 421 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 TMEM121Q9BTD3 319 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 TSSK1BQ9BXA7 367 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 ACSS3Q9H6R3 686 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 ARL8BQ9NVJ2 186 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 DDX56Q9NY93 547 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 LRCH1Q9Y2L9 728 aa12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 MTO1Q9Y2Z2 717 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-211ENST00000557658 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms