RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 ALDH9A1P49189 494 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 TBX2Q13207 712 aaPredicted RBP5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 SNAPC2Q13487 334 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 DGKDQ16760 1214 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 SLC35G1Q2M3R5 365 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 KHDC1LQ5JSQ8 128 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 MZT2AQ6P582 158 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 TXLNBQ8N3L3 684 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 ATG16L2Q8NAA4 619 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 NGDNQ8NEJ9 315 aaKnown RBP5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 CCHCR1Q8TD31 782 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 ZNF566Q969W8 418 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 DDX11Q96FC9 970 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 DYDC2Q96IM9 177 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 MRGPRX4Q96LA9 322 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 COLEC11Q9BWP8 271 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 MANSC1Q9H8J5 431 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 ITM2CQ9NQX7 267 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 SACM1LQ9NTJ5 587 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 GJB4Q9NTQ9 266 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 LRFN1Q9P244 771 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 THEGQ9P2T0 379 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 GRHPRQ9UBQ7 328 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 DNAH12Q6ZR08 3092 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 C4AP0C0L4 1744 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 TOGARAM1Q9Y4F4 1720 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 A0A1W2PPC4 97 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 RHOBTB3O94955 611 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 THP07101 528 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 DHRS4L1P0CG22 281 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 MALP21145 153 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 ECHS1P30084 290 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 GLRBP48167 497 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 PER3P56645 1201 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 ANTXR2P58335 489 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 IL13RA1P78552 427 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 CD83Q01151 205 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 CD69Q07108 199 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 RAB39AQ14964 217 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 RAB3GAP1Q15042 981 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 SKIDA1Q1XH10 827 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 C3orf38Q5JPI3 329 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 L1TD1Q5T7N2 865 aaKnown RBP5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 ABHD15Q6UXT9 468 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 ETV3LQ6ZN32 361 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 Q6ZVL8 140 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 MIB1Q86YT6 1006 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 CACNA2D3Q8IZS8 1091 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 MSL3Q8N5Y2 521 aaKnown RBP5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 IL17REQ8NFR9 667 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 TRAPPC12Q8WVT3 735 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 HOXB13Q92826 284 aaPredicted RBP5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 MUL1Q969V5 352 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 SHISA4Q96DD7 197 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 TSPAN17Q96FV3 270 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 CCDC120Q96HB5 630 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 HNRNPABQ99729 332 aaKnown RBP5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 GLIS2Q9BZE0 524 aaPredicted RBP5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 RRP7BPQ9NSQ0 103 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 POLR3BQ9NW08 1133 aaPredicted RBP5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 HSPBP1Q9NZL4 362 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 DNAI1Q9UI46 699 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 SIK3Q9Y2K2 1263 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 LAMB2P55268 1798 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 PPIP5K1Q6PFW1 1433 aa5.72□□□□□ -1.49
MTHFD1-216ENST00000557539 MYO18BQ8IUG5 2567 aa5.71□□□□□ -1.49
MTHFD1-216ENST00000557539 RRN3P2A6NIE6 340 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 J3KRW8 73 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 NCAM2O15394 837 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 PLA2G6O60733 806 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 LY86O95711 162 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 GCP02774 474 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 HPXP02790 462 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 LTA4HP09960 611 aaKnown RBP5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 EEF1GP26641 437 aaKnown RBP5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 NKX3-2P78367 333 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 TLE1Q04724 770 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 PRKG1Q13976 671 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 NR1I3Q14994 352 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 ZNF124Q15973 351 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 PFKFB4Q16877 469 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 CR1LQ2VPA4 569 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 SLC9C1Q4G0N8 1177 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 FKBP15Q5T1M5 1219 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 PHF19Q5T6S3 580 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 KANK2Q63ZY3 851 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 CYP26C1Q6V0L0 522 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 RPTNQ6XPR3 784 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 KRBA2Q6ZNG9 492 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 PPP1R3BQ86XI6 285 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 FAM26EQ8N5C1 309 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 ATP11CQ8NB49 1132 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 OR10H5Q8NGA6 315 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 BRIX1Q8TDN6 353 aaKnown RBP5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 C18orf8Q96DM3 657 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 SUCLG2Q96I99 432 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 MSLNLQ96KJ4 702 aa5.71□□□□□ -1.5
MTHFD1-216ENST00000557539 MRGPRX1Q96LB2 322 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms