RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 SPATS2LQ9NUQ6 558 aaKnown RBP17.15■□□□□ 0.34
SHMT2-232ENST00000557487 STYXL1Q9Y6J8 313 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 TMEM191CA6NGB0 347 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 HGSO14964 777 aaPredicted RBP17.15■□□□□ 0.34
SHMT2-232ENST00000557487 MAFGO15525 162 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 DNAJC6O75061 913 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 ECM2O94769 699 aaPredicted RBP17.15■□□□□ 0.34
SHMT2-232ENST00000557487 TGDSO95455 350 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 IL1BP01584 269 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 TMEM191BP0C7N4 346 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 PCK1P35558 622 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 ABL2P42684 1182 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 ARL4CP56559 192 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 PIGHQ14442 188 aaPredicted RBP17.15■□□□□ 0.34
SHMT2-232ENST00000557487 HIF1AQ16665 826 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 TAF1BQ53T94 588 aaPredicted RBP17.15■□□□□ 0.34
SHMT2-232ENST00000557487 FKBP1CQ5VVH2 108 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 PLA2G4FQ68DD2 849 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 DPY19L2Q6NUT2 758 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 ADGRD1Q6QNK2 874 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 ANO5Q75V66 913 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 CLNKQ7Z7G1 428 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 ZBED8Q8IZ13 594 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 C4orf33Q8N1A6 199 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 TTC13Q8NBP0 860 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 ZNF516Q92618 1163 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 BICD1Q96G01 975 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 MMADHCQ9H3L0 296 aaPredicted RBP17.15■□□□□ 0.34
SHMT2-232ENST00000557487 ARHGAP28Q9P2N2 729 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 GRID1Q9ULK0 1009 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 USTQ9Y2C2 406 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 PCDHB4Q9Y5E5 795 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 PCDHA10Q9Y5I2 948 aa17.15■□□□□ 0.34
SHMT2-232ENST00000557487 COL4A5P29400 1685 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 NFIBO00712 420 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 MMP8P22894 467 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 EPHB2P29323 1055 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 PDIA2Q13087 525 aaKnown RBP17.14■□□□□ 0.33
SHMT2-232ENST00000557487 PGM5Q15124 567 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 PRUNE1Q86TP1 453 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 PPIL6Q8IXY8 311 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 NIPA2Q8N8Q9 360 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 KCNV2Q8TDN2 545 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 DNAJC9Q8WXX5 260 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 BSNDQ8WZ55 320 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 SPOCK2Q92563 424 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 KIFC3Q9BVG8 833 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 TRIM55Q9BYV6 548 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 ZNF518BQ9C0D4 1074 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 FBXO28Q9NVF7 368 aa17.14■□□□□ 0.33
SHMT2-232ENST00000557487 MTO1Q9Y2Z2 717 aaKnown RBP17.14■□□□□ 0.33
SHMT2-232ENST00000557487 FARP1Q9Y4F1 1045 aaPredicted RBP17.14■□□□□ 0.33
SHMT2-232ENST00000557487 hCG_1818297A0A087WSY0 165 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 CCNE2O96020 404 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 LDHAP00338 332 aaKnown RBP17.13■□□□□ 0.33
SHMT2-232ENST00000557487 KRT4P19013 534 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 TNNI1P19237 187 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 SLFN12LQ6IEE8 588 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 ZNF449Q6P9G9 518 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 MFSD7Q6UXD7 560 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 POLNQ7Z5Q5 900 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 CEP170P1Q96L14 293 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 MAK16Q9BXY0 300 aaKnown RBP17.13■□□□□ 0.33
SHMT2-232ENST00000557487 DENND2DQ9H6A0 471 aaPredicted RBP17.13■□□□□ 0.33
SHMT2-232ENST00000557487 ACSS3Q9H6R3 686 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 GPBP1L1Q9HC44 474 aaPredicted RBP17.13■□□□□ 0.33
SHMT2-232ENST00000557487 PDLIM7Q9NR12 457 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 RABGEF1Q9UJ41 708 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 ZMYND8Q9ULU4 1186 aaPredicted RBP17.13■□□□□ 0.33
SHMT2-232ENST00000557487 LRRD1A4D1F6 860 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 TMEM150BA6NC51 233 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 SPDYE2BA6NHP3 402 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 E7ESA3 106 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 WDR46O15213 610 aaKnown RBP17.13■□□□□ 0.33
SHMT2-232ENST00000557487 NPTXRO95502 500 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 SPDYE6P0CI01 402 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 ATF7P17544 494 aaPredicted RBP17.13■□□□□ 0.33
SHMT2-232ENST00000557487 VHLP40337 213 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 PTDSS1P48651 473 aaKnown RBP17.13■□□□□ 0.33
SHMT2-232ENST00000557487 LIG4P49917 911 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 CCNHP51946 323 aaPredicted RBP17.13■□□□□ 0.33
SHMT2-232ENST00000557487 KLC1Q07866 573 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 KRT72Q14CN4 511 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 CTC1Q2NKJ3 1217 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 TDRD10Q5VZ19 366 aaKnown RBP17.13■□□□□ 0.33
SHMT2-232ENST00000557487 FAM91A1Q658Y4 838 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 C4orf50Q6ZRC1 276 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 PHLDB2Q86SQ0 1253 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 NLRX1Q86UT6 975 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 CHSY1Q86X52 802 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 NIM1KQ8IY84 436 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 SLC35B2Q8TB61 432 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 PYROXD1Q8WU10 500 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 LPAR1Q92633 364 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 FAM118BQ9BPY3 351 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 BTBD10Q9BSF8 475 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 KIF9Q9HAQ2 790 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 SNCAIPQ9Y6H5 919 aa17.13■□□□□ 0.33
SHMT2-232ENST00000557487 HAUS5O94927 633 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 PIGRP01833 764 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms