RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 NKIRAS1Q9NYS0 192 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 LGALS13Q9UHV8 139 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 CYTH4Q9UIA0 394 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 A0A1W2PPM1 405 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 TCRBV5S1A1TA0A578 114 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 IGF2BP3O00425 579 aaKnown RBP eCLIP18.7■□□□□ 0.58
XRCC3-218ENST00000557439 ADCY3O60266 1144 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 FAM189A1O60320 539 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 CSDE1O75534 798 aaKnown RBP18.7■□□□□ 0.58
XRCC3-218ENST00000557439 FARP2O94887 1054 aaPredicted RBP18.7■□□□□ 0.58
XRCC3-218ENST00000557439 SUN1O94901 812 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 ATG7O95352 703 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 LDHAP00338 332 aaKnown RBP18.7■□□□□ 0.58
XRCC3-218ENST00000557439 CD48P09326 243 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 CDH8P55286 799 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 DALRD3Q5D0E6 543 aaKnown RBP18.7■□□□□ 0.58
XRCC3-218ENST00000557439 DENND1BQ6P3S1 775 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 RCOR2Q8IZ40 523 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 ALLCQ8N6M5 410 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 C12orf65Q9H3J6 166 aaKnown RBP18.7■□□□□ 0.58
XRCC3-218ENST00000557439 L3MBTL1Q9Y468 752 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 hCG_1818297A0A087WSY0 165 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 RFC1P35251 1148 aaPredicted RBP18.69■□□□□ 0.58
XRCC3-218ENST00000557439 TCF7P36402 384 aaPredicted RBP18.69■□□□□ 0.58
XRCC3-218ENST00000557439 OAZ1P54368 228 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 STAT4Q14765 748 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 ANKRD22Q5VYY1 191 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 BRSK2Q8IWQ3 736 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 TMEM192Q8IY95 271 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 KIAA0319LQ8IZA0 1049 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 RNF149Q8NC42 400 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 STK38LQ9Y2H1 464 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 B4GALT5O43286 388 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 MSCO60682 206 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 TCEA3O75764 348 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 CD19P15391 556 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 IL1R2P27930 398 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 STAT5BP51692 787 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 TAF5Q15542 800 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 EAPPQ56P03 285 aaPredicted RBP18.69■□□□□ 0.58
XRCC3-218ENST00000557439 ARFGAP1Q8N6T3 406 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 ZNF112Q9UJU3 913 aa18.69■□□□□ 0.58
XRCC3-218ENST00000557439 MGAMO43451 1857 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 TJP3O95049 919 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 KRT15P19012 456 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 ALDH5A1P51649 535 aaPredicted RBP18.68■□□□□ 0.58
XRCC3-218ENST00000557439 PDIA2Q13087 525 aaKnown RBP18.68■□□□□ 0.58
XRCC3-218ENST00000557439 PTPN20Q4JDL3 420 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 ERICH1Q86X53 443 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 ECHDC2Q86YB7 292 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 RBM41Q96IZ5 413 aaKnown RBP18.68■□□□□ 0.58
XRCC3-218ENST00000557439 PPP1R16BQ96T49 567 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 VPS33BQ9H267 617 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 BTBD7Q9P203 1132 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 PCSK1NQ9UHG2 260 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 PIK3R2O00459 728 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 CDKN2BP42772 138 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 ENPEPQ07075 957 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 TARBP2Q15633 366 aaKnown RBP18.68■□□□□ 0.58
XRCC3-218ENST00000557439 OASLQ15646 514 aaKnown RBP18.68■□□□□ 0.58
XRCC3-218ENST00000557439 ACCSLQ4AC99 568 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 MSS51Q4VC12 460 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 ARHGEF18Q6ZSZ5 1173 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 TRABD2AQ86V40 505 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 MAGEB18Q96M61 343 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 CCDC77Q9BR77 488 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 NIFKQ9BYG3 293 aaKnown RBP18.68■□□□□ 0.58
XRCC3-218ENST00000557439 ARL2BPQ9Y2Y0 163 aa18.68■□□□□ 0.58
XRCC3-218ENST00000557439 FAM47DPA6NHR8 397 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 GSTA1P08263 222 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 KRT19P08727 400 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 KRT16P08779 473 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 SSTR1P30872 391 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 RPA3P35244 121 aaPredicted RBP18.67■□□□□ 0.58
XRCC3-218ENST00000557439 GALNTL6Q49A17 601 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 BBOF1Q8ND07 529 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 KLRG1Q96E93 195 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 C12orf42Q96LP6 360 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 TRABDQ9H4I3 376 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 GINM1Q9NU53 330 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 PRKAG3Q9UGI9 489 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 TCRBV7S3A2A0A539 114 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 SOWAHBA6NEL2 793 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 ARIH2O95376 493 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 FGFR1P11362 822 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 NQO1P15559 274 aaKnown RBP18.67■□□□□ 0.58
XRCC3-218ENST00000557439 CETN2P41208 172 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 VCPP55072 806 aaKnown RBP18.67■□□□□ 0.58
XRCC3-218ENST00000557439 TRPC3Q13507 836 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 SLC1A5Q15758 541 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 RAB6CQ53S08 254 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 TFDP3Q5H9I0 405 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 RNASEH2BQ5TBB1 312 aaKnown RBP18.67■□□□□ 0.58
XRCC3-218ENST00000557439 TMEM35BQ8NCS4 154 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 ACTL9Q8TC94 416 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 PITPNM3Q9BZ71 974 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 NIF3L1Q9GZT8 377 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 RAB6CQ9H0N0 254 aa18.67■□□□□ 0.58
XRCC3-218ENST00000557439 SIP14410 1827 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 CALB1P05937 261 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms