RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 GCNAQ96QF7 691 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 LPIN3Q9BQK8 851 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 ATXN3LQ9H3M9 355 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 KBTBD4Q9NVX7 518 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 ABI2Q9NYB9 513 aaPredicted RBP15.27■□□□□ 0.04
SNX6-210ENST00000557341 ITGA11Q9UKX5 1188 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 NDRG2Q9UN36 371 aaKnown RBP15.27■□□□□ 0.04
SNX6-210ENST00000557341 PIAS3Q9Y6X2 628 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 EP300Q09472 2414 aaPredicted RBP15.26■□□□□ 0.03
SNX6-210ENST00000557341 GOLGA8IPA6NC78 632 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 SHISA7A6NL88 538 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 GOLGA8JA6NMD2 632 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 KINO60870 393 aaKnown RBP15.26■□□□□ 0.03
SNX6-210ENST00000557341 PRPF6O94906 941 aaKnown RBP15.26■□□□□ 0.03
SNX6-210ENST00000557341 TMEM191BP0C7N4 346 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 CDC25CP30307 473 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 TSPY1Q01534 308 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 FCHO2Q0JRZ9 810 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 E2F4Q16254 413 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 TAF12Q16514 161 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 GPR158Q5T848 1215 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 HSCBQ8IWL3 235 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 GPD1LQ8N335 351 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 CSGALNACT1Q8TDX6 532 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 SNX21Q969T3 373 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 DHX58Q96C10 678 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 MSANTD3Q96H12 275 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 MKNK1Q9BUB5 465 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 TRIM9Q9C026 710 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 PCIF1Q9H4Z3 704 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 AGAP1Q9UPQ3 857 aa15.26■□□□□ 0.03
SNX6-210ENST00000557341 MYH10P35580 1976 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 ARNTLO00327 626 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 DPYSL4O14531 572 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 CHADO15335 359 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 EIF3DO15371 548 aaKnown RBP eCLIP15.25■□□□□ 0.03
SNX6-210ENST00000557341 CUTAO60888 179 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 HUS1O60921 280 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 HSP90AA1P07900 732 aaKnown RBP15.25■□□□□ 0.03
SNX6-210ENST00000557341 KRT19P08727 400 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 HAPLN1P10915 354 aaPredicted RBP15.25■□□□□ 0.03
SNX6-210ENST00000557341 PDIA4P13667 645 aaKnown RBP15.25■□□□□ 0.03
SNX6-210ENST00000557341 CDR1P51861 262 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 ASIC1P78348 528 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 AMPD3Q01432 767 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 BFSP1Q12934 665 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 C1orf228Q6PIY5 440 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 LRRTM3Q86VH5 581 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 ARID3BQ8IVW6 561 aaPredicted RBP15.25■□□□□ 0.03
SNX6-210ENST00000557341 TMEM86AQ8N2M4 240 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 PDCL2Q8N4E4 241 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 IQUBQ8NA54 791 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 LEO1Q8WVC0 666 aaPredicted RBP15.25■□□□□ 0.03
SNX6-210ENST00000557341 FAM3CQ92520 227 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 RSPRY1Q96DX4 576 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 IER2Q9BTL4 223 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 MTMR12Q9C0I1 747 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 PDE11AQ9HCR9 933 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 PRMT8Q9NR22 394 aaPredicted RBP15.25■□□□□ 0.03
SNX6-210ENST00000557341 OBP2AQ9NY56 170 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 TFIP11Q9UBB9 837 aaKnown RBP15.25■□□□□ 0.03
SNX6-210ENST00000557341 L1RE1Q9UN81 338 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 PCDHB5Q9Y5E4 795 aa15.25■□□□□ 0.03
SNX6-210ENST00000557341 RALGAPA1Q6GYQ0 2036 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 MLLT6P55198 1093 aaPredicted RBP15.24■□□□□ 0.03
SNX6-210ENST00000557341 CYP4F8P98187 520 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 MYL7Q01449 175 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 CSTF1Q05048 431 aaKnown RBP15.24■□□□□ 0.03
SNX6-210ENST00000557341 FZD5Q13467 585 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 NFE2Q16621 373 aaPredicted RBP15.24■□□□□ 0.03
SNX6-210ENST00000557341 ARHGAP29Q52LW3 1261 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 CSGALNACT2Q8N6G5 542 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 GLIS3Q8NEA6 775 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 SPATA18Q8TC71 538 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 GIPC2Q8TF65 315 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 HPS3Q969F9 1004 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 ANKRD36BP1Q96IX9 119 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 HINFPQ9BQA5 517 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 CHRDQ9H2X0 955 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 TASP1Q9H6P5 420 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 MAGEF1Q9HAY2 307 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 IL21Q9HBE4 155 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 GDAP2Q9NXN4 497 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 DDX43Q9NXZ2 648 aaKnown RBP15.24■□□□□ 0.03
SNX6-210ENST00000557341 ZMYM5Q9UJ78 669 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 R3HCC1Q9Y3T6 440 aaKnown RBP15.24■□□□□ 0.03
SNX6-210ENST00000557341 PCDHGA2Q9Y5H1 932 aa15.24■□□□□ 0.03
SNX6-210ENST00000557341 UBE4BO95155 1302 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 ZNF233A6NK53 670 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 PRAMEF12O95522 483 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 WEE1P30291 646 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 RBP5P82980 135 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 MTAPQ13126 283 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 SURF1Q15526 300 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 INTS6LQ5JSJ4 861 aaKnown RBP15.23■□□□□ 0.03
SNX6-210ENST00000557341 FAM26FQ5R3K3 315 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 FOXD4L5Q5VV16 416 aaPredicted RBP15.23■□□□□ 0.03
SNX6-210ENST00000557341 CNNM4Q6P4Q7 775 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 SHC4Q6S5L8 630 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 ADGRF2Q8IZF7 708 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms