RNA–Protein interactions for RNA: ENST00000557287.1

CKB-215, Transcript of creatine kinase B, human

TSL 2

Gene CKB, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKB-215	ENST00000557287	FGFR3	P22607	806 aa		18.8	■□□□□ 0.6
CKB-215	ENST00000557287	KRT83	P78385	493 aa		18.8	■□□□□ 0.6
CKB-215	ENST00000557287	SMARCB1	Q12824	385 aa		18.8	■□□□□ 0.6
CKB-215	ENST00000557287	ZNF394	Q53GI3	561 aa		18.8	■□□□□ 0.6
CKB-215	ENST00000557287	C9orf50	Q5SZB4	431 aa		18.8	■□□□□ 0.6
CKB-215	ENST00000557287	C10orf76	Q5T2E6	689 aa		18.8	■□□□□ 0.6
CKB-215	ENST00000557287	HGSNAT	Q68CP4	663 aa		18.8	■□□□□ 0.6
CKB-215	ENST00000557287	CD300LG	Q6UXG3	332 aa		18.8	■□□□□ 0.6
CKB-215	ENST00000557287	DDX53	Q86TM3	631 aa	Known RBP	18.8	■□□□□ 0.6
CKB-215	ENST00000557287	SLC47A2	Q86VL8	602 aa		18.8	■□□□□ 0.6
CKB-215	ENST00000557287	DCP1B	Q8IZD4	617 aa	Known RBP	18.8	■□□□□ 0.6
CKB-215	ENST00000557287	AGPAT1	Q99943	283 aa		18.8	■□□□□ 0.6
CKB-215	ENST00000557287	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
CKB-215	ENST00000557287	ARHGAP20	Q9P2F6	1191 aa		18.8	■□□□□ 0.6
CKB-215	ENST00000557287	CEP290	O15078	2479 aa		18.8	■□□□□ 0.6
CKB-215	ENST00000557287	CCP110	O43303	1012 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	LSM8	O95777	96 aa	Known RBP	18.79	■□□□□ 0.6
CKB-215	ENST00000557287	SOD2	P04179	222 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	PNMA6A	P0CW24	399 aa	Predicted RBP	18.79	■□□□□ 0.6
CKB-215	ENST00000557287	SNX16	P57768	344 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	PLCB3	Q01970	1234 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	SLC4A11	Q8NBS3	891 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	B3GALNT2	Q8NCR0	500 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	MSANTD4	Q8NCY6	345 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	WHAMM	Q8TF30	809 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	NOX5	Q96PH1	765 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	SYT15	Q9BQS2	421 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	ZNF518B	Q9C0D4	1074 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	HESX1	Q9UBX0	185 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	LZTS1	Q9Y250	596 aa		18.79	■□□□□ 0.6
CKB-215	ENST00000557287	NT5C1B-RDH14	C9J2C7	533 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	RBAK-RBAKDN	I3L0D1	243 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287		I3L4J1	428 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	UROD	P06132	367 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	PDGFRB	P09619	1106 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	PTPN1	P18031	435 aa	Known RBP	18.78	■□□□□ 0.6
CKB-215	ENST00000557287	CTNNB1	P35222	781 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	BMPR1A	P36894	532 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	EIF4A3	P38919	411 aa	Known RBP	18.78	■□□□□ 0.6
CKB-215	ENST00000557287	KIF11	P52732	1056 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	UBE3A	Q05086	875 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	CNGA2	Q16280	664 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	SLC18A3	Q16572	532 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	VARS2	Q5ST30	1063 aa	Known RBP	18.78	■□□□□ 0.6
CKB-215	ENST00000557287	E4F1	Q66K89	784 aa	Predicted RBP	18.78	■□□□□ 0.6
CKB-215	ENST00000557287	ACOT1	Q86TX2	421 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	CEP57	Q86XR8	500 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	TMEM139	Q8IV31	216 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	ZNF606	Q8WXB4	792 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	C11orf84	Q9BUA3	381 aa	Predicted RBP	18.78	■□□□□ 0.6
CKB-215	ENST00000557287	HERC2P3	Q9BVR0	1158 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	GPR62	Q9BZJ7	368 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	ELOVL4	Q9GZR5	314 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
CKB-215	ENST00000557287	SEPT11	Q9NVA2	429 aa	Known RBP	18.78	■□□□□ 0.6
CKB-215	ENST00000557287	HCST	Q9UBK5	93 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	NOCT	Q9UK39	431 aa	Known RBP	18.78	■□□□□ 0.6
CKB-215	ENST00000557287	PCDHGC3	Q9UN70	934 aa		18.78	■□□□□ 0.6
CKB-215	ENST00000557287	EPN1	Q9Y6I3	576 aa	Predicted RBP	18.78	■□□□□ 0.6
CKB-215	ENST00000557287	EIF3CL	B5ME19	914 aa	Known RBP	18.77	■□□□□ 0.6
CKB-215	ENST00000557287	FGF18	O76093	207 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	NDUFA10	O95299	355 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	GZMA	P12544	262 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	TKT	P29401	623 aa	Known RBP	18.77	■□□□□ 0.6
CKB-215	ENST00000557287	PBX3	P40426	434 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	GLUD2	P49448	558 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	CCZ1B	P86790	482 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	CCZ1	P86791	482 aa	Predicted RBP	18.77	■□□□□ 0.6
CKB-215	ENST00000557287	NFE2	Q16621	373 aa	Predicted RBP	18.77	■□□□□ 0.6
CKB-215	ENST00000557287	CTXN3	Q4LDR2	81 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	ARHGAP17	Q68EM7	881 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	C4orf50	Q6ZRC1	276 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	ZNF571	Q7Z3V5	609 aa	Predicted RBP	18.77	■□□□□ 0.6
CKB-215	ENST00000557287	NOP9	Q86U38	636 aa	Known RBP	18.77	■□□□□ 0.6
CKB-215	ENST00000557287	TDH	Q8IZJ6	230 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	TMEM35B	Q8NCS4	154 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	EIF3C	Q99613	913 aa	Known RBP	18.77	■□□□□ 0.6
CKB-215	ENST00000557287	CHP1	Q99653	195 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	MIS12	Q9H081	205 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	LHX5	Q9H2C1	402 aa		18.77	■□□□□ 0.6
CKB-215	ENST00000557287	TIMM13	Q9Y5L4	95 aa	Predicted RBP	18.77	■□□□□ 0.6
CKB-215	ENST00000557287	LINC01553	A4QN01	128 aa		18.76	■□□□□ 0.59
CKB-215	ENST00000557287	SOWAHD	A6NJG2	315 aa		18.76	■□□□□ 0.59
CKB-215	ENST00000557287		F8W810	466 aa		18.76	■□□□□ 0.59
CKB-215	ENST00000557287	MLLT1	Q03111	559 aa	Predicted RBP	18.76	■□□□□ 0.59
CKB-215	ENST00000557287	MRPL58	Q14197	206 aa	Known RBP	18.76	■□□□□ 0.59
CKB-215	ENST00000557287	INTS6L	Q5JSJ4	861 aa	Known RBP	18.76	■□□□□ 0.59
CKB-215	ENST00000557287	LCLAT1	Q6UWP7	414 aa		18.76	■□□□□ 0.59
CKB-215	ENST00000557287	MYCBPAP	Q8TBZ2	947 aa		18.76	■□□□□ 0.59
CKB-215	ENST00000557287	C2orf15	Q8WU43	125 aa	Known RBP	18.76	■□□□□ 0.59
CKB-215	ENST00000557287	PIK3R5	Q8WYR1	880 aa		18.76	■□□□□ 0.59
CKB-215	ENST00000557287	CYFIP2	Q96F07	1278 aa		18.76	■□□□□ 0.59
CKB-215	ENST00000557287	TRIM11	Q96F44	468 aa		18.76	■□□□□ 0.59
CKB-215	ENST00000557287	TGS1	Q96RS0	853 aa	Known RBP	18.76	■□□□□ 0.59
CKB-215	ENST00000557287	MRPL17	Q9NRX2	175 aa	Known RBP	18.76	■□□□□ 0.59
CKB-215	ENST00000557287	CHST7	Q9NS84	486 aa		18.76	■□□□□ 0.59
CKB-215	ENST00000557287	ADAMTS1	Q9UHI8	967 aa		18.76	■□□□□ 0.59
CKB-215	ENST00000557287	BACE2	Q9Y5Z0	518 aa		18.76	■□□□□ 0.59
CKB-215	ENST00000557287	TSC2	P49815	1807 aa		18.75	■□□□□ 0.59
CKB-215	ENST00000557287	C5orf67	F2Z3F1	127 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms