RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	ELAC1	Q9H777	363 aa	Known RBP	5.42	□□□□□ -1.54
SCFD1-223	ENST00000557076	RGS18	Q9NS28	235 aa		5.42	□□□□□ -1.54
SCFD1-223	ENST00000557076	C1orf112	Q9NSG2	853 aa		5.42	□□□□□ -1.54
SCFD1-223	ENST00000557076	ZSCAN32	Q9NX65	697 aa		5.42	□□□□□ -1.54
SCFD1-223	ENST00000557076	EPS15L1	Q9UBC2	864 aa		5.42	□□□□□ -1.54
SCFD1-223	ENST00000557076	VTI1B	Q9UEU0	232 aa		5.42	□□□□□ -1.54
SCFD1-223	ENST00000557076	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.42	□□□□□ -1.54
SCFD1-223	ENST00000557076	TAF6L	Q9Y6J9	622 aa		5.42	□□□□□ -1.54
SCFD1-223	ENST00000557076	NBEA	Q8NFP9	2946 aa		5.42	□□□□□ -1.54
SCFD1-223	ENST00000557076	IGSF9B	Q9UPX0	1349 aa		5.42	□□□□□ -1.54
SCFD1-223	ENST00000557076	KDM3A	Q9Y4C1	1321 aa		5.42	□□□□□ -1.54
SCFD1-223	ENST00000557076	ADAMTS20	P59510	1910 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076		C9IYK1	514 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076		M0QZ92	97 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076		M0R2C6	588 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	NARS	O43776	548 aa	Known RBP	5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	HMMR	O75330	724 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	PRAMEF1	O95521	474 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	CFB	P00751	764 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	CCND2	P30279	289 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	PPFIA1	Q13136	1202 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	PGM5	Q15124	567 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	ALX1	Q15699	326 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	GNPTAB	Q3T906	1256 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	SPECC1	Q5M775	1068 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	ODR4	Q5SWX8	454 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	CDCP2	Q5VXM1	449 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	LRSAM1	Q6UWE0	723 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	TMC5	Q6UXY8	1006 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	CYP26C1	Q6V0L0	522 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	C15orf39	Q6ZRI6	1047 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	LRRC55	Q6ZSA7	311 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	CCDC149	Q6ZUS6	474 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	CABP7	Q86V35	215 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	PPFIBP1	Q86W92	1011 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	DGKH	Q86XP1	1220 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	ITPRIP	Q8IWB1	547 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	ADGRF4	Q8IZF3	695 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	CELF5	Q8N6W0	485 aa	Known RBP	5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	FBXO27	Q8NI29	283 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	MZB1	Q8WU39	189 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	SEPT1	Q8WYJ6	367 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	TNPO1	Q92973	898 aa	Known RBP	5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	ZNF558	Q96NG5	402 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	INPP4A	Q96PE3	977 aa	Predicted RBP	5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	ADAM2	Q99965	735 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	FAM126A	Q9BYI3	521 aa	Predicted RBP	5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	RHOBTB2	Q9BYZ6	727 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	OSBPL6	Q9BZF3	934 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	TMEM117	Q9H0C3	514 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	ATP6V0A4	Q9HBG4	840 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	SLC2A4RG	Q9NR83	387 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	ECHDC1	Q9NTX5	307 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	TMEM161A	Q9NX61	479 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	ERAP1	Q9NZ08	941 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	TUBE1	Q9UJT0	475 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	USP18	Q9UMW8	372 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	PCDHB14	Q9Y5E9	798 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	PCDHA2	Q9Y5H9	948 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	PCDHA1	Q9Y5I3	950 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	NLRC5	Q86WI3	1866 aa		5.41	□□□□□ -1.54
SCFD1-223	ENST00000557076	LCT	P09848	1927 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	MYH8	P13535	1937 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	DENND3	A2RUS2	1198 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	OTOL1	A6NHN0	477 aa	Predicted RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	FADS2P1	A8MWK0	482 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	LAMTOR5	O43504	91 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	MGEA5	O60502	916 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	CLEC3A	O75596	197 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	PC	P11498	1178 aa	Known RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	MAGEA9	P43362	315 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	ALDH7A1	P49419	539 aa	Known RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	CDR1	P51861	262 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	POLG	P54098	1239 aa	Predicted RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	MRPS9	P82933	396 aa	Known RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	CSTF1	Q05048	431 aa	Known RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	SNW1	Q13573	536 aa	Known RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	PTPN14	Q15678	1187 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	CDC37	Q16543	378 aa	Predicted RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	QRICH1	Q2TAL8	776 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	HSF5	Q4G112	596 aa	Predicted RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	UTP14C	Q5TAP6	766 aa	Known RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	OVOS1	Q6IE37	1185 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	DCLRE1A	Q6PJP8	1040 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	FTSJ3	Q8IY81	847 aa	Known RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	SLC39A11	Q8N1S5	342 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	TMEM87A	Q8NBN3	555 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	PJA1	Q8NG27	643 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	RSAD2	Q8WXG1	361 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	CASD1	Q96PB1	797 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	PLCD4	Q9BRC7	762 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	DDX23	Q9BUQ8	820 aa	Known RBP	5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	AMN	Q9BXJ7	453 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	SMARCAD1	Q9H4L7	1026 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	CNNM2	Q9H8M5	875 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	SFXN1	Q9H9B4	322 aa		5.4	□□□□□ -1.54
SCFD1-223	ENST00000557076	BRMS1	Q9HCU9	246 aa		5.4	□□□□□ -1.54

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