RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SERPINC1P01008 464 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 CKMP06732 381 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 CDK11BP21127 795 aaKnown RBP4.96□□□□□ -1.62
SRP54-212ENST00000556992 CSF2RBP32927 897 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 PPP1R2P41236 205 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 TECP42680 631 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 GMPSP49915 693 aaPredicted RBP4.96□□□□□ -1.62
SRP54-212ENST00000556992 ZNF143P52747 638 aaPredicted RBP4.96□□□□□ -1.62
SRP54-212ENST00000556992 GFRA1P56159 465 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 GSDMDP57764 484 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 FOXE3Q13461 319 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 RRP1BQ14684 758 aaKnown RBP4.96□□□□□ -1.62
SRP54-212ENST00000556992 NCAPHQ15003 741 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 PRKD1Q15139 912 aaPredicted RBP4.96□□□□□ -1.62
SRP54-212ENST00000556992 CDC37Q16543 378 aaPredicted RBP4.96□□□□□ -1.62
SRP54-212ENST00000556992 CALCRLQ16602 461 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 SPATA1Q5VX52 437 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 KRT79Q5XKE5 535 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 VASNQ6EMK4 673 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 ISM2Q6H9L7 571 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 MOXD1Q6UVY6 613 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 RNF207Q6ZRF8 634 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 MIGA2Q7L4E1 593 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 CCDC186Q7Z3E2 898 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 TAX1BP1Q86VP1 789 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 IGSF22Q8N9C0 903 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 DTX3Q8N9I9 347 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 EXTL1Q92935 676 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 C1orf159Q96HA4 380 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 WRNIP1Q96S55 665 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 TMEM39BQ9GZU3 492 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 TMEM60Q9H2L4 133 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 CDIP1Q9H305 208 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 FANCLQ9NW38 375 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 TMEM260Q9NX78 707 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 PGAP2Q9UHJ9 254 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 DDX25Q9UHL0 483 aaKnown RBP4.96□□□□□ -1.62
SRP54-212ENST00000556992 FEM1BQ9UK73 627 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 ZBTB21Q9ULJ3 1066 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 PCDHA12Q9UN75 941 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 ZFR2Q9UPR6 939 aaKnown RBP4.96□□□□□ -1.62
SRP54-212ENST00000556992 MRPL11Q9Y3B7 192 aaKnown RBP4.96□□□□□ -1.62
SRP54-212ENST00000556992 TESMINQ9Y4I5 508 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 CNTNAP1P78357 1384 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 UBR3Q6ZT12 1888 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 A0A087X0B3 334 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 PVALEFA0A1B0GWK0 134 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 GCOM1H8Y6P7 765 aaPredicted RBP4.95□□□□□ -1.62
SRP54-212ENST00000556992 SMAD7O15105 426 aaKnown RBP4.95□□□□□ -1.62
SRP54-212ENST00000556992 TBX3O15119 743 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 SUSD5O60279 629 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 RPN1P04843 607 aaKnown RBP4.95□□□□□ -1.62
SRP54-212ENST00000556992 SCG5P05408 212 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 CYP3A4P08684 503 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 POLR2MP0CAP2 368 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 COL6A2P12110 1019 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 STAT2P52630 851 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 USP14P54578 494 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 UBASH3AP57075 661 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 STIM1Q13586 685 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 KCNB1Q14721 858 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 NOLC1Q14978 699 aaKnown RBP eCLIP4.95□□□□□ -1.62
SRP54-212ENST00000556992 KARSQ15046 597 aaKnown RBP4.95□□□□□ -1.62
SRP54-212ENST00000556992 SMAD2Q15796 467 aaKnown RBP4.95□□□□□ -1.62
SRP54-212ENST00000556992 GPR162Q16538 588 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 SKIDA1Q1XH10 827 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 SUPT20HL1Q3ZLR7 823 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 Q4G0T1 1027 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 ACBD5Q5T8D3 534 aaPredicted RBP4.95□□□□□ -1.62
SRP54-212ENST00000556992 ZNF658Q5TYW1 1059 aaPredicted RBP4.95□□□□□ -1.62
SRP54-212ENST00000556992 MRM1Q6IN84 353 aaKnown RBP4.95□□□□□ -1.62
SRP54-212ENST00000556992 MCF2L2Q86YR7 1114 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 FAM178BQ8IXR5 827 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 GPC2Q8N158 579 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 SAMD3Q8N6K7 520 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 PRPF38AQ8NAV1 312 aaKnown RBP4.95□□□□□ -1.62
SRP54-212ENST00000556992 SPC24Q8NBT2 197 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 ANKRD20A12PQ8NF67 263 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 ERMNQ8TAM6 284 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 ACER1Q8TDN7 264 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 MICAL1Q8TDZ2 1067 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 LPAR1Q92633 364 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 CDK5RAP3Q96JB5 506 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 FAM20AQ96MK3 541 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 CTAGE1Q96RT6 745 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 NUP88Q99567 741 aaPredicted RBP4.95□□□□□ -1.62
SRP54-212ENST00000556992 C7orf25Q9BPX7 421 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 KIAA1683Q9H0B3 1180 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 DEFB129Q9H1M3 183 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 ACBD3Q9H3P7 528 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 SMOC1Q9H4F8 434 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 VCPKMTQ9H867 229 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 TTC12Q9H892 705 aaPredicted RBP4.95□□□□□ -1.62
SRP54-212ENST00000556992 RRAGDQ9NQL2 400 aaPredicted RBP4.95□□□□□ -1.62
SRP54-212ENST00000556992 DLL4Q9NR61 685 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 IFNKQ9P0W0 207 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 C11orf21Q9P2W6 132 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 RWDD2AQ9UIY3 292 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 RABGAP1Q9Y3P9 1069 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms