RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 TMEM132DQ14C87 1099 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 MFSD7Q6UXD7 560 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 CCDC25Q86WR0 208 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 ERICH1Q86X53 443 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 EXD1Q8NHP7 514 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 RUNDC3BQ96NL0 473 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 SLITRK1Q96PX8 696 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 CPXM1Q96SM3 734 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 TINF2Q9BSI4 451 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 PLVAPQ9BX97 442 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 ASIC3Q9UHC3 531 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 NOVA2Q9UNW9 492 aaKnown RBP10.72□□□□□ -0.69
TMEM260-211ENST00000556648 AGAP1Q9UPQ3 857 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 GINS2Q9Y248 185 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 SMIM23A6NLE4 172 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 PPEF2O14830 753 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 CAND2O75155 1236 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 PPFIA4O75335 1185 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 CILPO75339 1184 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 MICAL2O94851 1124 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 NPTXRO95502 500 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 HOXD8P13378 290 aaPredicted RBP10.71□□□□□ -0.69
TMEM260-211ENST00000556648 EIF4BP23588 611 aaKnown RBP10.71□□□□□ -0.69
TMEM260-211ENST00000556648 NFX1Q12986 1120 aaKnown RBP10.71□□□□□ -0.69
TMEM260-211ENST00000556648 SLC29A2Q14542 456 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 DENND2CQ68D51 928 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 DCUN1D2Q6PH85 259 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 RHBDF2Q6PJF5 856 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 RUFY4Q6ZNE9 571 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 ARFGAP1Q8N6T3 406 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 EMC1Q8N766 993 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 RAPGEF5Q92565 580 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 HAUS1Q96CS2 278 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 HPDLQ96IR7 371 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 PARK7Q99497 189 aaKnown RBP10.71□□□□□ -0.69
TMEM260-211ENST00000556648 DDX23Q9BUQ8 820 aaKnown RBP10.71□□□□□ -0.69
TMEM260-211ENST00000556648 EIF2AQ9BY44 585 aaKnown RBP10.71□□□□□ -0.69
TMEM260-211ENST00000556648 ADAMTS10Q9H324 1103 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 PABPC3Q9H361 631 aaKnown RBP10.71□□□□□ -0.69
TMEM260-211ENST00000556648 FLRT1Q9NZU1 646 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 CALCOCO1Q9P1Z2 691 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 NEU2Q9Y3R4 380 aa10.71□□□□□ -0.69
TMEM260-211ENST00000556648 TRIP11Q15643 1979 aa10.71□□□□□ -0.7
TMEM260-211ENST00000556648 PIK3R2O00459 728 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 ERLIN2O94905 339 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 ATF7P17544 494 aaPredicted RBP10.7□□□□□ -0.7
TMEM260-211ENST00000556648 RFC1P35251 1148 aaPredicted RBP10.7□□□□□ -0.7
TMEM260-211ENST00000556648 ITGA8P53708 1063 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 MAGOHP61326 146 aaKnown RBP10.7□□□□□ -0.7
TMEM260-211ENST00000556648 YWHAEP62258 255 aaKnown RBP10.7□□□□□ -0.7
TMEM260-211ENST00000556648 PTPN11Q06124 597 aaPredicted RBP10.7□□□□□ -0.7
TMEM260-211ENST00000556648 IFFO1Q0D2I5 559 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 FAM110CQ1W6H9 321 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 ZFYVE27Q5T4F4 411 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 AGBL2Q5U5Z8 902 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 PPP1R2P3Q6NXS1 205 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 DPH6Q7L8W6 267 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 GLIS1Q8NBF1 620 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 C3orf20Q8ND61 904 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 EPS8L3Q8TE67 593 aaKnown RBP10.7□□□□□ -0.7
TMEM260-211ENST00000556648 KIF12Q96FN5 646 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 METTL5Q9NRN9 209 aaKnown RBP10.7□□□□□ -0.7
TMEM260-211ENST00000556648 MTRF1LQ9UGC7 380 aaKnown RBP10.7□□□□□ -0.7
TMEM260-211ENST00000556648 HES2Q9Y543 173 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 ZNF236Q9UL36 1845 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 CITO14578 2027 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 RALGAPA2Q2PPJ7 1873 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 M0QYV0 167 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 DYNC1LI2O43237 492 aaPredicted RBP10.7□□□□□ -0.7
TMEM260-211ENST00000556648 PAEPP09466 180 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 NUDT17P0C025 328 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 SMIM10L2AP0DMW4 78 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 SMIM10L2BP0DMW5 78 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 PSMA2P25787 234 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 IL1R2P27930 398 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 HOXA11P31270 313 aaPredicted RBP10.7□□□□□ -0.7
TMEM260-211ENST00000556648 PSMC1P62191 440 aaKnown RBP10.7□□□□□ -0.7
TMEM260-211ENST00000556648 DGKDQ16760 1214 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 SMTNL2Q2TAL5 461 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 RAB6CQ53S08 254 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 SPDYCQ5MJ68 293 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 EMC10Q5UCC4 262 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 SPOCD1Q6ZMY3 1216 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 XYLT1Q86Y38 959 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 UBA3Q8TBC4 463 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 KAT2BQ92831 832 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 TMEM176AQ96HP8 235 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 OSMRQ99650 979 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 ZNF518BQ9C0D4 1074 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 RAB6CQ9H0N0 254 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 LHX5Q9H2C1 402 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 DPP3Q9NY33 737 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 WHRNQ9P202 907 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 PARP2Q9UGN5 583 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 LCMT1Q9UIC8 334 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 GJD2Q9UKL4 321 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMEM260-211ENST00000556648 CEP83Q9Y592 693 aa10.7□□□□□ -0.7
TMEM260-211ENST00000556648 A0A1B0GUA9 196 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 UNCXA6NJT0 531 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms