RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 SLC1A1P43005 524 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 PAK2Q13177 524 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 NT5DC4Q86YG4 428 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 MAGOHBQ96A72 148 aaKnown RBP19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 MRPL45Q9BRJ2 306 aaKnown RBP19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 ZNF518BQ9C0D4 1074 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 GOLGA2P5Q9HBQ8 144 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 KLHL11Q9NVR0 708 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 RNF186Q9NXI6 227 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 M0QYV0 167 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 DAPK3O43293 454 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 HOXC8P31273 242 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 DR1Q01658 176 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 TWF2Q6IBS0 349 aaKnown RBP19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 ALKAL1Q6UXT8 129 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 FAM228AQ86W67 206 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 TSEN2Q8NCE0 465 aaKnown RBP19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 BEST2Q8NFU1 509 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 CPXM1Q96SM3 734 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 SPC25Q9HBM1 224 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 BARX2Q9UMQ3 279 aaPredicted RBP19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 CDY2AQ9Y6F7 541 aa19.4■□□□□ 0.7
SDR39U1-220ENST00000556548 TMEM191CA6NGB0 347 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 SEPT4O43236 478 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 RARAP10276 462 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 AXLP30530 894 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 CDH5P33151 784 aaPredicted RBP19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 GYS2P54840 703 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 OGDHQ02218 1023 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 NFX1Q12986 1120 aaKnown RBP19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 PCBP1Q15365 356 aaKnown RBP eCLIP19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 ZBTB6Q15916 424 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 PPP1R2P3Q6NXS1 205 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 CCDC50Q8IVM0 306 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 NME8Q8N427 588 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 ARRDC4Q8NCT1 418 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 RIN2Q8WYP3 895 aaPredicted RBP19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 DDX27Q96GQ7 796 aaKnown RBP19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 HEMGNQ9BXL5 484 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 SYNCQ9H7C4 482 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 XPNPEP3Q9NQH7 507 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 GTF2IRD1Q9UHL9 959 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 IPPQ9Y573 584 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 SMIM28A0A1B0GU29 152 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 F8VP50 259 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 ZNF252P-AS1Q0IIN9 211 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 ATP13A4Q4VNC1 1196 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 TTC27Q6P3X3 843 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 EMBQ6PCB8 327 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 LPIN3Q9BQK8 851 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 HERPUD2Q9BSE4 406 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 NEUROG2Q9H2A3 272 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 CNTN3Q9P232 1028 aa19.39■□□□□ 0.69
SDR39U1-220ENST00000556548 TCRBV5S1A1TA0A578 114 aa19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 HCRTO43612 131 aa19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 ALDH1A1P00352 501 aa19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 IBSPP21815 317 aaPredicted RBP19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 KCNJ1P48048 391 aa19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 PSMC1P62191 440 aaKnown RBP19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 ZFYVE27Q5T4F4 411 aa19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 SMG8Q8ND04 991 aaKnown RBP19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 LHX5Q9H2C1 402 aa19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 IP6K2Q9UHH9 426 aa19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 DERAQ9Y315 318 aa19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 UTP11Q9Y3A2 253 aaKnown RBP19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.38■□□□□ 0.69
SDR39U1-220ENST00000556548 PHF2O75151 1096 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 ERBB2P04626 1255 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 ASGR1P07306 291 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 PRKAR2AP13861 404 aaKnown RBP19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 CYP3A5P20815 502 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 MRPS6P82932 125 aaKnown RBP19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 GPS2Q13227 327 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 KCNA10Q16322 511 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 SGO2Q562F6 1265 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 C9orf57Q5W0N0 161 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 TAF2Q6P1X5 1199 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 ACOT1Q86TX2 421 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 C1orf54Q8WWF1 131 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 FAXDC2Q96IV6 333 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 NT5C1AQ9BXI3 368 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 PTPN22Q9Y2R2 807 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 SCN1AP35498 2009 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 KPNA6O60684 536 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 VDRP11473 427 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 CAPN2P17655 700 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 ECHS1P30084 290 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 INCA1Q0VD86 236 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 SNX1Q13596 522 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 SIX1Q15475 284 aaPredicted RBP19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 CLUL1Q15846 466 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 RHOT1Q8IXI2 618 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 ACSF2Q96CM8 615 aaPredicted RBP19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 HHIPL1Q96JK4 782 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 VIPAS39Q9H9C1 493 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 MTUS1Q9ULD2 1270 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 NME7Q9Y5B8 376 aa19.37■□□□□ 0.69
SDR39U1-220ENST00000556548 MEIS3P2A8K0S8 358 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms