RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.51□□□□□ -1.37
PRPF39-209ENST00000556353 CCDC88BA6NC98 1476 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 VWC2LB2RUY7 222 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 GCOM1H8Y6P7 765 aaPredicted RBP6.5□□□□□ -1.37
PRPF39-209ENST00000556353 VPS4BO75351 444 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 KIF20AO95235 890 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 RHOP08100 348 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 CHRM3P20309 590 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 PGS1Q32NB8 556 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 BRDTQ58F21 947 aaPredicted RBP6.5□□□□□ -1.37
PRPF39-209ENST00000556353 ZNF788Q6ZQV5 615 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 USP37Q86T82 979 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 HSPBAP1Q96EW2 488 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 FAM167AQ96KS9 214 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 ACTRT3Q9BYD9 372 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 MRPL46Q9H2W6 279 aaKnown RBP6.5□□□□□ -1.37
PRPF39-209ENST00000556353 KMT5AQ9NQR1 393 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 MRPS18AQ9NVS2 196 aaKnown RBP6.5□□□□□ -1.37
PRPF39-209ENST00000556353 ST3GAL5Q9UNP4 418 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 AGAP1Q9UPQ3 857 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 RAD54BQ9Y620 910 aa6.5□□□□□ -1.37
PRPF39-209ENST00000556353 EIF4G3O43432 1585 aaKnown RBP6.49□□□□□ -1.37
PRPF39-209ENST00000556353 TTLL1O95922 423 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 MAP2K6P52564 334 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 KRTAP1-1Q07627 177 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 TCF15Q12870 199 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 PTPROQ16827 1216 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 CCDC157Q569K6 752 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 RBM20Q5T481 1227 aaKnown RBP6.49□□□□□ -1.37
PRPF39-209ENST00000556353 CATIPQ7Z7H3 387 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 SH2D3CQ8N5H7 860 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 FKBP10Q96AY3 582 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 AMBRA1Q9C0C7 1298 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.49□□□□□ -1.37
PRPF39-209ENST00000556353 EHD3Q9NZN3 535 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 WNT6Q9Y6F9 365 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 CHD1O14646 1710 aa6.49□□□□□ -1.37
PRPF39-209ENST00000556353 TARBP1Q13395 1621 aaKnown RBP6.48□□□□□ -1.37
PRPF39-209ENST00000556353 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.48□□□□□ -1.37
PRPF39-209ENST00000556353 M0QYG6 137 aa6.48□□□□□ -1.37
PRPF39-209ENST00000556353 NR2F6P10588 404 aa6.48□□□□□ -1.37
PRPF39-209ENST00000556353 TYRP14679 529 aa6.48□□□□□ -1.37
PRPF39-209ENST00000556353 IBSPP21815 317 aaPredicted RBP6.48□□□□□ -1.37
PRPF39-209ENST00000556353 CD6P30203 668 aa6.48□□□□□ -1.37
PRPF39-209ENST00000556353 PROK1P58294 105 aa6.48□□□□□ -1.37
PRPF39-209ENST00000556353 PTF1AQ7RTS3 328 aa6.48□□□□□ -1.37
PRPF39-209ENST00000556353 PPP1R32Q7Z5V6 425 aa6.48□□□□□ -1.37
PRPF39-209ENST00000556353 AMIGO2Q86SJ2 522 aa6.48□□□□□ -1.37
PRPF39-209ENST00000556353 PPP1R3BQ86XI6 285 aa6.48□□□□□ -1.37
PRPF39-209ENST00000556353 FAM136AQ96C01 138 aa6.48□□□□□ -1.37
PRPF39-209ENST00000556353 BRINP2Q9C0B6 783 aa6.48□□□□□ -1.37
PRPF39-209ENST00000556353 ZNF608Q9ULD9 1512 aaPredicted RBP6.48□□□□□ -1.37
PRPF39-209ENST00000556353 AHSGP02765 367 aa6.47□□□□□ -1.37
PRPF39-209ENST00000556353 VCAM1P19320 739 aa6.47□□□□□ -1.37
PRPF39-209ENST00000556353 AKAP5P24588 427 aa6.47□□□□□ -1.37
PRPF39-209ENST00000556353 ITPKBP27987 946 aa6.47□□□□□ -1.37
PRPF39-209ENST00000556353 GCLCP48506 637 aaPredicted RBP6.47□□□□□ -1.37
PRPF39-209ENST00000556353 PLAC9Q5JTB6 97 aa6.47□□□□□ -1.37
PRPF39-209ENST00000556353 RASAL3Q86YV0 1011 aa6.47□□□□□ -1.37
PRPF39-209ENST00000556353 SRRM1Q8IYB3 904 aaKnown RBP6.47□□□□□ -1.37
PRPF39-209ENST00000556353 CAMKK1Q8N5S9 505 aa6.47□□□□□ -1.37
PRPF39-209ENST00000556353 RFKQ969G6 155 aa6.47□□□□□ -1.37
PRPF39-209ENST00000556353 GTPBP4Q9BZE4 634 aaKnown RBP6.47□□□□□ -1.37
PRPF39-209ENST00000556353 PNPOQ9NVS9 261 aa6.47□□□□□ -1.37
PRPF39-209ENST00000556353 PCDHA1Q9Y5I3 950 aa6.47□□□□□ -1.37
PRPF39-209ENST00000556353 SETD1BQ9UPS6 1966 aaKnown RBP6.47□□□□□ -1.37
PRPF39-209ENST00000556353 TOPBP1Q92547 1522 aa6.46□□□□□ -1.37
PRPF39-209ENST00000556353 ZFXP17010 805 aaPredicted RBP6.46□□□□□ -1.38
PRPF39-209ENST00000556353 TOB1P50616 345 aaPredicted RBP6.46□□□□□ -1.38
PRPF39-209ENST00000556353 FOXF2Q12947 444 aa6.46□□□□□ -1.38
PRPF39-209ENST00000556353 TBCCQ15814 346 aa6.46□□□□□ -1.38
PRPF39-209ENST00000556353 FAM160B1Q5W0V3 765 aa6.46□□□□□ -1.38
PRPF39-209ENST00000556353 DNMBPQ6XZF7 1577 aa6.46□□□□□ -1.38
PRPF39-209ENST00000556353 BRIX1Q8TDN6 353 aaKnown RBP6.46□□□□□ -1.38
PRPF39-209ENST00000556353 HASPINQ8TF76 798 aa6.46□□□□□ -1.38
PRPF39-209ENST00000556353 MVB12AQ96EY5 273 aa6.46□□□□□ -1.38
PRPF39-209ENST00000556353 NUP88Q99567 741 aaPredicted RBP6.46□□□□□ -1.38
PRPF39-209ENST00000556353 RIMBP3CA6NJZ7 1639 aa6.46□□□□□ -1.38
PRPF39-209ENST00000556353 RIMBP3BA6NNM3 1639 aa6.46□□□□□ -1.38
PRPF39-209ENST00000556353 RIMBP3Q9UFD9 1639 aa6.46□□□□□ -1.38
PRPF39-209ENST00000556353 H3BUI4 141 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 EBLN1P0CF75 366 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 CCT8P50990 548 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 NEK2P51955 445 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 EXOSC10Q01780 885 aaKnown RBP6.45□□□□□ -1.38
PRPF39-209ENST00000556353 BMPR2Q13873 1038 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 TEDDM1Q5T9Z0 273 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 FCRLBQ6BAA4 426 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 FAM109AQ8N4B1 249 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 FAM46DQ8NEK8 389 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 ATRIPQ8WXE1 791 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 NELL2Q99435 816 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 TCF7L1Q9HCS4 588 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 ADAM21Q9UKJ8 722 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 NOP58Q9Y2X3 529 aaKnown RBP6.45□□□□□ -1.38
PRPF39-209ENST00000556353 WDR97A6NE52 1622 aa6.45□□□□□ -1.38
PRPF39-209ENST00000556353 MANSC4A6NHS7 340 aaPredicted RBP6.44□□□□□ -1.38
PRPF39-209ENST00000556353 NXPH3O95157 252 aa6.44□□□□□ -1.38
PRPF39-209ENST00000556353 PIM1P11309 404 aaPredicted RBP6.44□□□□□ -1.38
PRPF39-209ENST00000556353 EXOSC9Q06265 439 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms