RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 PRMT7Q9NVM4 692 aaPredicted RBP6.88□□□□□ -1.31
HIF1A-208ENST00000556237 DDX20Q9UHI6 824 aaKnown RBP6.88□□□□□ -1.31
HIF1A-208ENST00000556237 AGO2Q9UKV8 859 aaKnown RBP6.88□□□□□ -1.31
HIF1A-208ENST00000556237 ZKSCAN5Q9Y2L8 839 aa6.88□□□□□ -1.31
HIF1A-208ENST00000556237 LUC7L2Q9Y383 392 aaKnown RBP6.88□□□□□ -1.31
HIF1A-208ENST00000556237 STYXL1Q9Y6J8 313 aa6.88□□□□□ -1.31
HIF1A-208ENST00000556237 SRCAPQ6ZRS2 3230 aa6.88□□□□□ -1.31
HIF1A-208ENST00000556237 A0A0B4J269 797 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 TMEM238LA0A1B0GVL6 79 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 TTC26A0AVF1 554 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 MBLAC1A4D2B0 266 aaPredicted RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 CLDN3O15551 220 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 MSCO60682 206 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 CSDE1O75534 798 aaKnown RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 PRNPP04156 253 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 F13BP05160 661 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 ASGR1P07306 291 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 TRIM49P0CI25 452 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 TRIM49CP0CI26 452 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 ESRRAP11474 423 aaPredicted RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 HARSP12081 509 aaKnown RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 TRIM21P19474 475 aaKnown RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 SLC9A1P19634 815 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 ITPKAP23677 461 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 FMO5P49326 533 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 ACOT2P49753 483 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 FXR1P51114 621 aaKnown RBP eCLIP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 GPC3P51654 580 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 C1QTNF8P60827 252 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 ADAM17P78536 824 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 TAGLNQ01995 201 aaKnown RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 NCBP1Q09161 790 aaKnown RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 TMEM62Q0P6H9 643 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 BFSP1Q12934 665 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 PRPF4BQ13523 1007 aaKnown RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 HSP90AA2PQ14568 343 aaPredicted RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 FAM47CQ5HY64 1035 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 MAP3K21Q5TCX8 1036 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 NXPE4Q6UWF7 544 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 RUFY4Q6ZNE9 571 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 SRGAP1Q7Z6B7 1085 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 RNF180Q86T96 592 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 NME8Q8N427 588 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 TC2NQ8N9U0 490 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 C12orf50Q8NA57 414 aaPredicted RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 ZNF397Q8NF99 534 aaPredicted RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 OR8K1Q8NGG5 319 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 DNAJB3Q8WWF6 145 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 SLC35C1Q96A29 364 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 CCDC127Q96BQ5 260 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 FBXL18Q96ME1 805 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 MSTO1Q9BUK6 570 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 LSM14BQ9BX40 385 aaKnown RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 NFKBIZQ9BYH8 718 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 BCO2Q9BYV7 579 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 GCOM2Q9BZD3 368 aaPredicted RBP6.87□□□□□ -1.31
HIF1A-208ENST00000556237 OSBPL7Q9BZF2 842 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 HAPLN2Q9GZV7 340 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 CCDC113Q9H0I3 377 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 MINDY3Q9H8M7 445 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 IFT122Q9HBG6 1241 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 PYCARDQ9ULZ3 195 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 CAPN11Q9UMQ6 739 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 GINS2Q9Y248 185 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 SIK3Q9Y2K2 1263 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 PTCH2Q9Y6C5 1203 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 ZSWIM8A7E2V4 1837 aa6.87□□□□□ -1.31
HIF1A-208ENST00000556237 STX10O60499 249 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 GPR32O75388 356 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 TOM1L1O75674 476 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 GYPCP04921 128 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 EDN1P05305 212 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 ADRB2P07550 413 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 IQCF3P0C7M6 154 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 ACTN1P12814 892 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 FGFR4P22455 802 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 PON1P27169 355 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 CST5P28325 142 aaPredicted RBP6.86□□□□□ -1.31
HIF1A-208ENST00000556237 GCLMP48507 274 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 DLG4P78352 724 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 ZBED6P86452 979 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 CCZ1BP86790 482 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 CCZ1P86791 482 aaPredicted RBP6.86□□□□□ -1.31
HIF1A-208ENST00000556237 MBTD1Q05BQ5 628 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 CYP24A1Q07973 514 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 PPP3CAQ08209 521 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 CETN1Q12798 172 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 SNRNP35Q16560 246 aaKnown RBP6.86□□□□□ -1.31
HIF1A-208ENST00000556237 FAM187BQ17R55 369 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 EXOC3L4Q17RC7 722 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 KIZQ2M2Z5 673 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 SEZ6Q53EL9 994 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 FIGNQ5HY92 759 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 ATF7IP2Q5U623 682 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 EEF1DP3Q658K8 133 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 CCSAPQ6IQ19 270 aaPredicted RBP6.86□□□□□ -1.31
HIF1A-208ENST00000556237 OGFOD2Q6N063 350 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 CRELD2Q6UXH1 353 aaPredicted RBP6.86□□□□□ -1.31
HIF1A-208ENST00000556237 TSHZ1Q6ZSZ6 1077 aa6.86□□□□□ -1.31
HIF1A-208ENST00000556237 CACNA2D4Q7Z3S7 1137 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms