RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	MYH10	P35580	1976 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MOXD2P	A6NHM9	499 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142		M0QZ92	97 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PTGES	O14684	152 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	P4HA1	P13674	534 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	NSF	P46459	744 aa	Known RBP	10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MAMLD1	Q13495	774 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MESD	Q14696	234 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	C2CD6	Q53TS8	623 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GLRA4	Q5JXX5	417 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	FBXO47	Q5MNV8	452 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	WDR93	Q6P2C0	686 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TRAF7	Q6Q0C0	670 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	RNF180	Q86T96	592 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PDCL2	Q8N4E4	241 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	USP38	Q8NB14	1042 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GSTCD	Q8NEC7	633 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CAGE1	Q8TC20	777 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ALG3	Q92685	438 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	KRT35	Q92764	455 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TRAIP	Q9BWF2	469 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	APOL6	Q9BWW8	343 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TRIM7	Q9C029	511 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TRIM6	Q9C030	488 aa	Predicted RBP	10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.07	□□□□□ -0.8	9e-29	■■■■□ 21.1
HNRNPC-223	ENST00000556142	PDCL3	Q9H2J4	239 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	RBM12	Q9NTZ6	932 aa	Known RBP	10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ZNF446	Q9NWS9	450 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	KLK14	Q9P0G3	267 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ADAM22	Q9P0K1	906 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PARP2	Q9UGN5	583 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CYTH4	Q9UIA0	394 aa		10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.07	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TARSL2	A2RTX5	802 aa	Known RBP	10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MIF4GD	A9UHW6	222 aa	Known RBP	10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	SPTLC1	O15269	473 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MGEA5	O60502	916 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CD4	P01730	458 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CTSH	P09668	335 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	RHOXF2B	P0C7M4	288 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	VDR	P11473	427 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	LRPAP1	P30533	357 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	DNA2	P51530	1060 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	NDST1	P52848	882 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GSC	P56915	257 aa	Predicted RBP	10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CNGA2	Q16280	664 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PPP1R15B	Q5SWA1	713 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MMS22L	Q6ZRQ5	1243 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PHLDB2	Q86SQ0	1253 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TTC39C	Q8N584	583 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TMEM35B	Q8NCS4	154 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	C1orf131	Q8NDD1	294 aa	Known RBP	10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PPP1R10	Q96QC0	940 aa	Known RBP	10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	RHOXF2	Q9BQY4	288 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.06	□□□□□ -0.8	2e-8	■■■□□ 14.8
HNRNPC-223	ENST00000556142	MRPL45	Q9BRJ2	306 aa	Known RBP	10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	C11orf70	Q9BRQ4	267 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	LRRC1	Q9BTT6	524 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	SELENOO	Q9BVL4	669 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	WNT8A	Q9H1J5	351 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CARD9	Q9H257	536 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TRMT13	Q9NUP7	481 aa	Known RBP	10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	FAM105A	Q9NUU6	356 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MIOS	Q9NXC5	875 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GDAP2	Q9NXN4	497 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PCDHA3	Q9Y5H8	950 aa		10.06	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MEIS3P2	A8K0S8	358 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142		O00370	1275 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GPR182	O15218	404 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MED7	O43513	233 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CEP104	O60308	925 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ZNF623	O75123	536 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MICAL2	O94851	1124 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CLSTN1	O94985	981 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CTNNA1	P35221	906 aa	Known RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	THPO	P40225	353 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MARCKSL1	P49006	195 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	VSNL1	P62760	191 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TNNC1	P63316	161 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MYO1E	Q12965	1108 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ORC1	Q13415	861 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	LPIN1	Q14693	890 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	BRD3	Q15059	726 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CCDC181	Q5TID7	509 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	LIN9	Q5TKA1	542 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TWF2	Q6IBS0	349 aa	Known RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	FEZF2	Q8TBJ5	459 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	C11orf49	Q9H6J7	331 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	HMX1	Q9NP08	348 aa	Predicted RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PRDM6	Q9NQX0	595 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	FAM53C	Q9NYF3	392 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ANAPC7	Q9UJX3	599 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	KIAA1257	Q9ULG3	409 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PADI3	Q9ULW8	664 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	SQOR	Q9Y6N5	450 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CCDC151	A5D8V7	595 aa		10.05	□□□□□ -0.8

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