RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CDX2Q99626 313 aaPredicted RBP8.15□□□□□ -1.1
TDP1-214ENST00000556063 SYT15Q9BQS2 421 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 MRPL45Q9BRJ2 306 aaKnown RBP8.15□□□□□ -1.1
TDP1-214ENST00000556063 NUP58Q9BVL2 599 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 TRIM5Q9C035 493 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 RBSNQ9H1K0 784 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 APOBEC3GQ9HC16 384 aaKnown RBP8.15□□□□□ -1.1
TDP1-214ENST00000556063 CISHQ9NSE2 258 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 IFNKQ9P0W0 207 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 DNAJC12Q9UKB3 198 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 STXBP5LQ9Y2K9 1186 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 PCDHB4Q9Y5E5 795 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 MTCH2Q9Y6C9 303 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 CDY1Q9Y6F8 540 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 SPDYE4A6NLX3 237 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 HIDE1A8MVS5 230 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 TBC1D4O60343 1298 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 LRRN2O75325 713 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 CILPO75339 1184 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 PDGFRBP09619 1106 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 UCHL3P15374 230 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 RPL17P18621 184 aaKnown RBP8.14□□□□□ -1.11
TDP1-214ENST00000556063 CD58P19256 250 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 RAP1GAPP47736 663 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 NRIP1P48552 1158 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 NDST1P52848 882 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 CDH8P55286 799 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 BPIFB4P59827 614 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 ROR1Q01973 937 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 GPR17Q13304 367 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 DUSP6Q16828 381 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 INTS6LQ5JSJ4 861 aaKnown RBP8.14□□□□□ -1.11
TDP1-214ENST00000556063 LIN9Q5TKA1 542 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 KLHDC7AQ5VTJ3 777 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 PHLDB3Q6NSJ2 640 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 C4orf50Q6ZRC1 276 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 CCDC149Q6ZUS6 474 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 Q7L0L9 218 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 CACNA2D4Q7Z3S7 1137 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 RBM23Q86U06 439 aaKnown RBP8.14□□□□□ -1.11
TDP1-214ENST00000556063 SPATA2LQ8IUW3 424 aaPredicted RBP8.14□□□□□ -1.11
TDP1-214ENST00000556063 CRYBG2Q8N1P7 616 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 ZNF461Q8TAF7 563 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 SPPL2BQ8TCT7 592 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 HDAC7Q8WUI4 952 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 KBTBD7Q8WVZ9 684 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 MYLIPQ8WY64 445 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 NAP1L5Q96NT1 182 aaPredicted RBP8.14□□□□□ -1.11
TDP1-214ENST00000556063 SPAG5Q96R06 1193 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 CLSTN3Q9BQT9 956 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 EDEM3Q9BZQ6 932 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 XPO4Q9C0E2 1151 aaKnown RBP8.14□□□□□ -1.11
TDP1-214ENST00000556063 ZCWPW1Q9H0M4 648 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 SDCBP2Q9H190 292 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 PLEKHA4Q9H4M7 779 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 FAM207AQ9NSI2 230 aaPredicted RBP8.14□□□□□ -1.11
TDP1-214ENST00000556063 MTMR10Q9NXD2 777 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 AFF4Q9UHB7 1163 aaKnown RBP8.14□□□□□ -1.11
TDP1-214ENST00000556063 KIAA1257Q9ULG3 409 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 SIK3Q9Y2K2 1263 aa8.14□□□□□ -1.11
TDP1-214ENST00000556063 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.14□□□□□ -1.11
TDP1-214ENST00000556063 COL4A4P53420 1690 aaPredicted RBP8.14□□□□□ -1.11
TDP1-214ENST00000556063 MYH10P35580 1976 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 PRRG1O14668 218 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 PER2O15055 1255 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 TEX33O43247 280 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 CLASP2O75122 1294 aaKnown RBP8.13□□□□□ -1.11
TDP1-214ENST00000556063 PAEPP09466 180 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 TPM1P09493 284 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 CCDC172P0C7W6 258 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 KRT5P13647 590 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 ATF2P15336 505 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 PTPN1P18031 435 aaKnown RBP8.13□□□□□ -1.11
TDP1-214ENST00000556063 ACAT1P24752 427 aaKnown RBP8.13□□□□□ -1.11
TDP1-214ENST00000556063 LMO2P25791 158 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 USP8P40818 1118 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 STAT1P42224 750 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 TUFMP49411 452 aaKnown RBP8.13□□□□□ -1.11
TDP1-214ENST00000556063 SLC8A3P57103 927 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 POLR2FP61218 127 aaKnown RBP8.13□□□□□ -1.11
TDP1-214ENST00000556063 PLD1Q13393 1074 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 RAPGEF1Q13905 1077 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 TRIM14Q14142 442 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 ADGRE1Q14246 886 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 DRAP1Q14919 205 aaPredicted RBP8.13□□□□□ -1.11
TDP1-214ENST00000556063 ARHGAP44Q17R89 818 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 SLC39A12Q504Y0 691 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 TCEAL5Q5H9L2 206 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 TMEM270Q6UE05 265 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 ACOT1Q86TX2 421 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 OSTM1Q86WC4 334 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 PALB2Q86YC2 1186 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 GLYCTKQ8IVS8 523 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 ARHGEF19Q8IW93 802 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 MICALL1Q8N3F8 863 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 EFHBQ8N7U6 833 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 B3GALNT2Q8NCR0 500 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 KREMEN2Q8NCW0 462 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 ZNF397Q8NF99 534 aaPredicted RBP8.13□□□□□ -1.11
TDP1-214ENST00000556063 OR10T2Q8NGX3 314 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms