RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 GPS1Q13098 491 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 SGSM1Q2NKQ1 1148 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 C2CD6Q53TS8 623 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 CYP4F22Q6NT55 531 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 DCUN1D2Q6PH85 259 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 DNERQ8NFT8 737 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 ZNF398Q8TD17 642 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 FAXDC2Q96IV6 333 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 RSRC1Q96IZ7 334 aaKnown RBP17.05■□□□□ 0.32
TUBB3-209ENST00000555609 L3MBTL3Q96JM7 780 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-209ENST00000555609 TMEM237Q96Q45 408 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 TEX13BQ9BXU2 312 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 PSMC3IPQ9P2W1 217 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-209ENST00000555609 ZNF214Q9UL59 606 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-209ENST00000555609 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-209ENST00000555609 ADCY3O60266 1144 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 ZWINTO95229 277 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 PECAM1P16284 738 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-209ENST00000555609 POLR2BP30876 1174 aaKnown RBP17.05■□□□□ 0.32
TUBB3-209ENST00000555609 CDKN2BP42772 138 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 MSH2P43246 934 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 SLC8A3P57103 927 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 ATP11AP98196 1134 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 MKRN4PQ13434 485 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-209ENST00000555609 STXBP2Q15833 593 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 EFHC2Q5JST6 749 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 ECHDC2Q86YB7 292 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 AGGF1Q8N302 714 aaeCLIP17.05■□□□□ 0.32
TUBB3-209ENST00000555609 SLC35B2Q8TB61 432 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 FNIP1Q8TF40 1166 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 TMEM143Q96AN5 459 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 ALKBH8Q96BT7 664 aaKnown RBP17.05■□□□□ 0.32
TUBB3-209ENST00000555609 TARS2Q9BW92 718 aaKnown RBP17.05■□□□□ 0.32
TUBB3-209ENST00000555609 MLXIPLQ9NP71 852 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 RPL26L1Q9UNX3 145 aaKnown RBP17.05■□□□□ 0.32
TUBB3-209ENST00000555609 IVNS1ABPQ9Y6Y0 642 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 PARP14Q460N5 1801 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 HNRNPCL1O60812 293 aaKnown RBP17.04■□□□□ 0.32
TUBB3-209ENST00000555609 KRT7P08729 469 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 DPEP1P16444 411 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 ATF7P17544 494 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-209ENST00000555609 ATP4AP20648 1035 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 GJC1P36383 396 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 RASSF2P50749 326 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 RPL7AP62424 266 aaKnown RBP17.04■□□□□ 0.32
TUBB3-209ENST00000555609 E2F5Q15329 346 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 ZKSCAN8Q15776 578 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-209ENST00000555609 ZFYVE27Q5T4F4 411 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 EXOC8Q8IYI6 725 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 THNSL1Q8IYQ7 743 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 INPP5DQ92835 1189 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 ZBTB45Q96K62 511 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-209ENST00000555609 NIF3L1Q9GZT8 377 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 FBXO40Q9UH90 709 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 FER1L6Q2WGJ9 1857 aa17.04■□□□□ 0.32
TUBB3-209ENST00000555609 KRT10P13645 584 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 KRT15P19012 456 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 CCNG1P51959 295 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 GEMIN4P57678 1058 aaKnown RBP17.03■□□□□ 0.32
TUBB3-209ENST00000555609 MOGSQ13724 837 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 HADHQ16836 314 aaKnown RBP17.03■□□□□ 0.32
TUBB3-209ENST00000555609 KLHL38Q2WGJ6 581 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 DAB2IPQ5VWQ8 1189 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 KAZNQ674X7 775 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 ERICH1Q86X53 443 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 PPIL6Q8IXY8 311 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 PLCD3Q8N3E9 789 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 GPATCH11Q8N954 259 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 OR5B17Q8NGF7 314 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 LRRC8CQ8TDW0 803 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 PRCCQ92733 491 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-209ENST00000555609 RMDN2Q96LZ7 410 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 LHX5Q9H2C1 402 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 VPS37BQ9H9H4 285 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 BATF3Q9NR55 127 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 PICK1Q9NRD5 415 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 PHTF1Q9UMS5 762 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-209ENST00000555609 GAS2O43903 313 aaKnown RBP17.03■□□□□ 0.32
TUBB3-209ENST00000555609 EDF1O60869 148 aaKnown RBP17.03■□□□□ 0.32
TUBB3-209ENST00000555609 GBP2P32456 591 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-209ENST00000555609 ARL4CP56559 192 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 MGAT5Q09328 741 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 ZNF252P-AS1Q0IIN9 211 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 SF3A3Q12874 501 aaKnown RBP eCLIP17.03■□□□□ 0.32
TUBB3-209ENST00000555609 DGKZQ13574 1117 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 CRYMQ14894 314 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 TARBP2Q15633 366 aaKnown RBP17.03■□□□□ 0.32
TUBB3-209ENST00000555609 TAZQ16635 292 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 DUOXA2Q1HG44 320 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 ATP11CQ8NB49 1132 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 AGAP11Q8TF27 550 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 MCEEQ96PE7 176 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 MRPL4Q9BYD3 311 aaKnown RBP17.03■□□□□ 0.32
TUBB3-209ENST00000555609 LRMDAQ9H2I8 198 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 HOXC10Q9NYD6 342 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 WDR35Q9P2L0 1181 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 ZMYND8Q9ULU4 1186 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-209ENST00000555609 C15orf41Q9Y2V0 281 aa17.03■□□□□ 0.32
TUBB3-209ENST00000555609 SNCAIPQ9Y6H5 919 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms