RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 RAB20Q9NX57 234 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 DDX43Q9NXZ2 648 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 DNAJB4Q9UDY4 337 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 GOLGB1Q14789 3259 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 EXOC1LA0A1B0GW35 172 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 CYP26A1O43174 497 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 DGAT1O75907 488 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 TJP3O95049 919 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 CYP11B1P15538 503 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 ADSSP30520 456 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 RFC5P40937 340 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 MAGEA4P43358 317 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 FMO1Q01740 532 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 GCNT1Q02742 428 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 LAMB3Q13751 1172 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 KRT72Q14CN4 511 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 CTC1Q2NKJ3 1217 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 TAF1BQ53T94 588 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 BRDTQ58F21 947 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 PLA2G4FQ68DD2 849 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 ACAD10Q6JQN1 1059 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 NSMFQ6X4W1 530 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 LRRC74BQ6ZQY2 392 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 ANO5Q75V66 913 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 ARHGAP22Q7Z5H3 698 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 CLNKQ7Z7G1 428 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 ZNF677Q86XU0 584 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 GPD1LQ8N335 351 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 TTC8Q8TAM2 541 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 C1orf54Q8WWF1 131 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 NCSTNQ92542 709 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 DHX38Q92620 1227 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 PTPRN2Q92932 1015 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 KCNN1Q92952 543 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 ZNF653Q96CK0 615 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 TRIM11Q96F44 468 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 CEP170P1Q96L14 293 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 RNF146Q9NTX7 359 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 ANKFY1Q9P2R3 1169 aa11.28□□□□□ -0.6
MTHFD1-210ENST00000555252 GOLGA8IPA6NC78 632 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 GOLGA8JA6NMD2 632 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 F8W8V4 182 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 ENTPD5O75356 428 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 IL1BP01584 269 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 NR3C2P08235 984 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 MYBL1P10243 752 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 BPIFB4P59827 614 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 CYP24A1Q07973 514 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 MTMR2Q13614 643 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 BAATQ14032 418 aaPredicted RBP11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 RCN2Q14257 317 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 HHATQ5VTY9 493 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 ZNF449Q6P9G9 518 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 NSUN6Q8TEA1 469 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 SCG3Q8WXD2 468 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 POMGNT1Q8WZA1 660 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 SEMA4DQ92854 862 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 KAT5Q92993 513 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 AZIN2Q96A70 460 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 ALKBH8Q96BT7 664 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 POP1Q99575 1024 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 TBK1Q9UHD2 729 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 ANGPTL2Q9UKU9 493 aa11.27□□□□□ -0.61
MTHFD1-210ENST00000555252 GSTTP1A0A1W2PQM5 241 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 TM9SF1O15321 606 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 MAP3K7O43318 606 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 TYROBPO43914 113 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 TGDSO95455 350 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 PSMG1O95456 288 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 BACE1P56817 501 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 IZUMO3Q5VZ72 239 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 SLC47A2Q86VL8 602 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 ZSWIM2Q8NEG5 633 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 STMN2Q93045 179 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 CCDC127Q96BQ5 260 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 C12orf42Q96LP6 360 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 PAIP2Q9BPZ3 127 aaKnown RBP11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 CADM1Q9BY67 442 aaKnown RBP11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 PDLIM7Q9NR12 457 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 CHST7Q9NS84 486 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 PIM2Q9P1W9 311 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 GABBR1Q9UBS5 961 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 SRCAPQ6ZRS2 3230 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 TMEM150BA6NC51 233 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 H0Y3Z8 333 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 GSC2O15499 205 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 PSTPIP1O43586 416 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 HAUS5O94927 633 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 STBD1O95210 358 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 CBX6O95503 412 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 GCAP28676 217 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 CACNA2D1P54289 1103 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 TGFB2P61812 414 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 KLF1Q13351 362 aaPredicted RBP11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 RCN1Q15293 331 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 CCDC142Q17RM4 750 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 CLEC16AQ2KHT3 1053 aa11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 KHDC1Q4VXA5 237 aaKnown RBP11.26□□□□□ -0.61
MTHFD1-210ENST00000555252 PPP1R2P3Q6NXS1 205 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms